RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 RAD52P43351 418 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 ALDH18A1P54886 795 aaKnown RBP4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 POLE2P56282 527 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 VAMP2P63027 116 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 TXNL4AP83876 142 aaKnown RBP4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 FAM187BQ17R55 369 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 FCRLBQ6BAA4 426 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 OR4N4Q8N0Y3 316 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 MAFAQ8NHW3 353 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 THAP4Q8WY91 577 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 RRP36Q96EU6 259 aaKnown RBP4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 RSRC1Q96IZ7 334 aaKnown RBP4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 NUDT16L1Q9BRJ7 211 aaKnown RBP4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 SLITRK6Q9H5Y7 841 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 RIOX1Q9H6W3 641 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 PRKRIP1Q9H875 184 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 SH3BP4Q9P0V3 963 aa4.98□□□□□ -1.61
HMGB1P48-201ENST00000446155 A0A087X0M5 115 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 CCDC187A0A096LP49 1063 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 A0A1B0GX30 115 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 A0A1W2PRQ8 180 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 FSD2A1L4K1 749 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 BTBD19C9JJ37 291 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 FCHO1O14526 889 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 RPP40O75818 363 aaKnown RBP4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 CER1O95813 267 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 GSTM5P46439 218 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 COPB1P53618 953 aaKnown RBP4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 CLNS1AP54105 237 aaKnown RBP4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 NAP1L1P55209 391 aaKnown RBP4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 RAE1P78406 368 aaKnown RBP4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 CCDC15Q0P6D6 951 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 SEMA3BQ13214 749 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 CSHL1Q14406 222 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 LARS2Q15031 903 aaKnown RBP4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 DLGAP5Q15398 846 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 ALDH1L2Q3SY69 923 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 TMEM63BQ5T3F8 832 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 ACSM6Q6P461 480 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 RD3Q7Z3Z2 195 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 TRABD2AQ86V40 505 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 P3H2Q8IVL5 708 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 NRSN1Q8IZ57 195 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 TSPYL6Q8N831 410 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 AFG1LQ8WV93 481 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 NPIPB3Q92617 1050 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 MCRS1Q96EZ8 462 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 RITA1Q96K30 269 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 TREX2Q9BQ50 279 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 SEPSECSQ9HD40 501 aaKnown RBP4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 PRDM8Q9NQV8 689 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 ABHD10Q9NUJ1 306 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 SPATA31A1Q5TZJ5 1347 aa4.97□□□□□ -1.61
HMGB1P48-201ENST00000446155 CCDC196A0A1B0GTZ2 297 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 A0A1W2PPH5 198 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 POC1B-GALNT4F8VUJ3 575 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZBED4O75132 1171 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 ACTL6BO94805 426 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 ALADP13716 330 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 GYS1P13807 737 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 MMP8P22894 467 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 MCCP23508 829 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 GALNSP34059 522 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 CDK7P50613 346 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 CCR5P51681 352 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 TERF1P54274 439 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 PRKAA2P54646 552 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 UBE3AQ05086 875 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 CUL4BQ13620 913 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 CCNG2Q16589 344 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 SMN1Q16637 294 aaKnown RBP4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 SUMO4Q6EEV6 95 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 C16orf89Q6UX73 402 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZNF788Q6ZQV5 615 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 GALNT5Q7Z7M9 940 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 SLC44A2Q8IWA5 706 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 CCDC117Q8IWD4 279 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 GALNT4Q8N4A0 578 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 TCP11L2Q8N4U5 519 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZNF398Q8TD17 642 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 NTN5Q8WTR8 489 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 SLC22A17Q8WUG5 538 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 RFFLQ8WZ73 363 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 COG8Q96MW5 612 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 RTKNQ9BST9 563 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 DDX23Q9BUQ8 820 aaKnown RBP4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 CINPQ9BW66 212 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 PABPC3Q9H361 631 aaKnown RBP4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 CDCP1Q9H5V8 836 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 PREBQ9HCU5 417 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 TMEM160Q9NX00 188 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 CNTN6Q9UQ52 1028 aa4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 UBE2J1Q9Y385 318 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P48-201ENST00000446155 LINC01548A6NM66 108 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 RBMXL2O75526 392 aaKnown RBP4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 LATS1O95835 1130 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 CHRM5P08912 532 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZNF37AP17032 561 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 MATN1P21941 496 aa4.95□□□□□ -1.62
HMGB1P48-201ENST00000446155 DUSP1P28562 367 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms