RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 TBC1D3FA6NER0 549 aaPredicted RBP4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D3LB9A6J9 549 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 SYN3O14994 580 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 HTATSF1O43719 755 aaKnown RBP4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 KIF1CO43896 1103 aaKnown RBP4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 PRAMEF10O60809 474 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 MFAP3LO75121 409 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 ERN1O75460 977 aaKnown RBP4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TSPAN9O75954 239 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 ELANEP08246 267 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 INHBBP09529 407 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D3HP0C7X1 549 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 FOXL2P58012 376 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 LRMPQ12912 555 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TUBB3Q13509 450 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 PKN2Q16513 984 aaKnown RBP4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZNF766Q5HY98 468 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D3GQ6DHY5 549 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D3CQ6IPX1 549 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 UNC5DQ6UXZ4 953 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 FAM47EQ6ZV65 393 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 MCM10Q7L590 875 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D3Q8IZP1 549 aaPredicted RBP4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 C17orf53Q8N3J3 647 aaPredicted RBP4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 RFWD2Q8NHY2 731 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 KIF1BPQ96EK5 621 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 WDYHV1Q96HA8 205 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 FAR2Q96K12 515 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 PIP5K1AQ99755 562 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 CTDSP1Q9GZU7 261 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 PDE11AQ9HCR9 933 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 COMMD8Q9NX08 183 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZNF112Q9UJU3 913 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 LYVE1Q9Y5Y7 322 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 GRM8O00222 908 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 PPM1DO15297 605 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 NKX2-8O15522 239 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 KIF5CO60282 957 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 TPPPO94811 219 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 HSPA4LO95757 839 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 HLA-DOAP06340 250 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 SPARCP09486 303 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 LYL1P12980 280 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 STK4Q13043 487 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 HSP90B2PQ58FF3 399 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 PLBD1Q6P4A8 553 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 MICALCLQ6ZW33 695 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 MON1AQ86VX9 555 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 VSIG1Q86XK7 387 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 BRSK2Q8IWQ3 736 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 TAGAPQ8N103 731 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 WDTC1Q8N5D0 677 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 SNX19Q92543 992 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 ATP2A3Q93084 1043 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 ATP6V1E2Q96A05 226 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 TMEM125Q96AQ2 219 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 TRMT61AQ96FX7 289 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 FEM1CQ96JP0 617 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 IWS1Q96ST2 819 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 EYA3Q99504 573 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 PPP1R14DQ9NXH3 145 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 ALKBH4Q9NXW9 302 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 CGNQ9P2M7 1197 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 NKX1-2Q9UD57 310 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 CD207Q9UJ71 328 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 SUFUQ9UMX1 484 aa4.4□□□□□ -1.71
CDC42BPA-207ENST00000441725 RAD54L2Q9Y4B4 1467 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 CCDC187A0A096LP49 1063 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 A0A1W2PS29 197 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 GAGE10A6NGK3 116 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 ETV2O00321 342 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 TRIAP1O43715 76 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 URODP06132 367 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 NR2F1P10589 423 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 NFKBIAP25963 317 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 APOBEC3AP31941 199 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 ABCD1P33897 745 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 GRK5P34947 590 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 NNMTP40261 264 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 GARSP41250 739 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 PSMC6P62333 389 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 EPS8Q12929 822 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 HLXQ14774 488 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 NAA25Q14CX7 972 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 DNTTIP2Q5QJE6 756 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 GALNT13Q8IUC8 556 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 FBXO15Q8NCQ5 510 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 SCFD2Q8WU76 684 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 OVCA2Q8WZ82 227 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 NCSTNQ92542 709 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 FAM136AQ96C01 138 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 OR14A2Q96R54 314 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 LMF1Q96S06 567 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 CLSTN3Q9BQT9 956 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 POLR3CQ9BUI4 534 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 SYNPO2LQ9H987 977 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 ERVK-5Q9HDB9 667 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 KCND2Q9NZV8 630 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 XPO7Q9UIA9 1087 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms