RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 DNAAF3Q8N9W5 541 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 SLC4A11Q8NBS3 891 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 APOPT1Q96IL0 206 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 CDRT15Q96T59 188 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 SNX25Q9H3E2 840 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 TUT1Q9H6E5 874 aaKnown RBP10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 PCDH9Q9HC56 1237 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 ATXN10Q9UBB4 475 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 SOX13Q9UN79 622 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 SIGLEC16A6NMB1 481 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 TMX2-CTNND1H3BSU7 103 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 KCNK1O00180 336 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 APOL1O14791 398 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 ALOX15BO15296 676 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 ATP9BO43861 1147 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 MT-ND1P03886 318 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 CSH1P0DML2 217 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 CSH2P0DML3 217 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 OSBPP22059 807 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 OAZ1P54368 228 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 TSPY1Q01534 308 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 PPIDQ08752 370 aaKnown RBP10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 PTP4A2Q12974 167 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 PITRM1Q5JRX3 1037 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 CES4AQ5XG92 561 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 XYLT1Q86Y38 959 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 ARFGAP1Q8N6T3 406 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 PNPLA1Q8N8W4 532 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 KLHL23Q8NBE8 558 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 MCUQ8NE86 351 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 USP33Q8TEY7 942 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 EME1Q96AY2 570 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 VCPIP1Q96JH7 1222 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 CATSPER2Q96P56 530 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 TRAPPC9Q96Q05 1148 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 DPEP3Q9H4B8 488 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 PIF1Q9H611 641 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 CAB39LQ9H9S4 337 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 SENP1Q9P0U3 644 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 MFHAS1Q9Y4C4 1052 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 ZBBXA8MT70 800 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 CLDN5O00501 218 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 PRPF4O43172 522 aaKnown RBP eCLIP10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 CLIC3O95833 236 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 LGALS2P05162 132 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 EIF4BP23588 611 aaKnown RBP10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 EPHA3P29320 983 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 RBP5P82980 135 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 GBE1Q04446 702 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 FLOT2Q14254 428 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC10A6Q3KNW5 377 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 RIOX2Q8IUF8 465 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 MYO1HQ8N1T3 1032 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 TTC13Q8NBP0 860 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 DCAKDQ8WVC6 231 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 WDR83Q9BRX9 315 aaKnown RBP10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 RBPJLQ9UBG7 517 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 TUBGCP4Q9UGJ1 667 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZNF180Q9UJW8 692 aa10.21□□□□□ -0.78
CDC42SE1-202ENST00000439374 ADORA2AP29274 412 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 TYK2P29597 1187 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 MLH1P40692 756 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 TFDP2Q14188 446 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 TLR1Q15399 786 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 DLG2Q15700 870 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 TRMT5Q32P41 509 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 ATG16L1Q676U5 607 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 TWF2Q6IBS0 349 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 KLHDC10Q6PID8 442 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 FRMD7Q6ZUT3 714 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 CHST15Q7LFX5 561 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 IFNEQ86WN2 208 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 RAVER1Q8IY67 606 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 HASPINQ8TF76 798 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 ITFG2Q969R8 447 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 OLFM3Q96PB7 478 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 PEBP4Q96S96 227 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 LGMNQ99538 433 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 NIFKQ9BYG3 293 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 SIK2Q9H0K1 926 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 TMEM134Q9H6X4 195 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 S100A14Q9HCY8 104 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 PRM3Q9NNZ6 103 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 RPS6KL1Q9Y6S9 549 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 TM7SF2O76062 418 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 NAA20P61599 178 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 SPDYAQ5MJ70 313 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 PDPK2PQ6A1A2 396 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 SNX32Q86XE0 403 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 RNF168Q8IYW5 571 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 EXT2Q93063 718 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 SKA1Q96BD8 255 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZNF512Q96ME7 567 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 HAUS8Q9BT25 410 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 KLC2Q9H0B6 622 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 XYLT2Q9H1B5 865 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 ACSS3Q9H6R3 686 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 EPS8L2Q9H6S3 715 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 PRMT7Q9NVM4 692 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms