RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 TRIM43BA6NCK2 446 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 TBKBP1A7MCY6 615 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 XYLBO75191 536 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 GRAP2O75791 330 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 LTFP02788 710 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 AMHP03971 560 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 ZFXP17010 805 aaPredicted RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 ITIH2P19823 946 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 TGM2P21980 687 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 BDNFP23560 247 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 KLRC2P26717 231 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 L1CAMP32004 1257 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 HTR7P34969 479 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 SSR1P43307 286 aaKnown RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 HCAR3P49019 387 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 LBX1P52954 281 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 BCAR1P56945 870 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 RBM10P98175 930 aaKnown RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 CAV1Q03135 178 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 ADCY2Q08462 1091 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 SEMA3BQ13214 749 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 BYSLQ13895 437 aaKnown RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 PAN2Q504Q3 1202 aaKnown RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 ODF2Q5BJF6 829 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 ALS2CLQ60I27 953 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 GPRIN1Q7Z2K8 1008 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 SPATA2LQ8IUW3 424 aaPredicted RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 CCDC105Q8IYK2 499 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 CACTIN-AS1Q8N1I8 211 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 TMEM199Q8N511 208 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 ZNF276Q8N554 614 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 ALLCQ8N6M5 410 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 CCDC89Q8N998 374 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 KCTD6Q8NC69 237 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 BBOF1Q8ND07 529 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 SPPL2BQ8TCT7 592 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 HASPINQ8TF76 798 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 PIK3R5Q8WYR1 880 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 ART4Q93070 314 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 TRIM43Q96BQ3 446 aaPredicted RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 RTP4Q96DX8 246 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 PAWRQ96IZ0 340 aaKnown RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 RNF157Q96PX1 679 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 TMEM209Q96SK2 561 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 KCNK16Q96T55 309 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 TTPALQ9BTX7 342 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 SNRNP25Q9BV90 132 aaKnown RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 FBXO44Q9H4M3 255 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 AKTIPQ9H8T0 292 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 PCDH18Q9HCL0 1135 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 WDR6Q9NNW5 1121 aaKnown RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 NGRNQ9NPE2 291 aaKnown RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 MTMR10Q9NXD2 777 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 GRHL1Q9NZI5 618 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 OGFRQ9NZT2 677 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 MTRRQ9UBK8 725 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 FZD10Q9ULW2 581 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 SCML2Q9UQR0 700 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 ATP11BQ9Y2G3 1177 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 PRG3Q9Y2Y8 225 aaPredicted RBP7.93□□□□□ -1.14
HMGB2-202ENST00000438704 PCDHB5Q9Y5E4 795 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 CENPFP49454 3210 aa7.93□□□□□ -1.14
HMGB2-202ENST00000438704 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.92□□□□□ -1.14
HMGB2-202ENST00000438704 ESYT3A0FGR9 886 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 CFAP69A5D8W1 941 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 ZSCAN5CA6NGD5 496 aaPredicted RBP7.92□□□□□ -1.14
HMGB2-202ENST00000438704 YJEFN3A6XGL0 299 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 E7ENQ6 273 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 PI4K2BG5E9Z4 385 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 TP73O15350 636 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 DAPK3O43293 454 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 CST8O60676 142 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 PPFIA2O75334 1257 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 SEC31AO94979 1220 aaKnown RBP7.92□□□□□ -1.14
HMGB2-202ENST00000438704 LAG3P18627 525 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 TFE3P19532 575 aaPredicted RBP7.92□□□□□ -1.14
HMGB2-202ENST00000438704 STIP1P31948 543 aaKnown RBP7.92□□□□□ -1.14
HMGB2-202ENST00000438704 NR2C2P49116 596 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 ALDH7A1P49419 539 aaKnown RBP7.92□□□□□ -1.14
HMGB2-202ENST00000438704 CXCR3P49682 368 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 NDUFV1P49821 464 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 GATMP50440 423 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 SLC5A3P53794 718 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 CDH6P55285 790 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 WDR5P61964 334 aaKnown RBP7.92□□□□□ -1.14
HMGB2-202ENST00000438704 ATP11AP98196 1134 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 XRCC4Q13426 336 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 NOMO1Q15155 1222 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 SMTNL2Q2TAL5 461 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 USP41Q3LFD5 358 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 CTXN3Q4LDR2 81 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 DCAF6Q58WW2 860 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 KCNT1Q5JUK3 1230 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 FAM171A1Q5VUB5 890 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 MSANTD2Q6P1R3 559 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 RHBDF2Q6PJF5 856 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 ZDHHC24Q6UX98 284 aa7.92□□□□□ -1.14
HMGB2-202ENST00000438704 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.92□□□□□ -1.143e-19■■■■■ 33
HMGB2-202ENST00000438704 ADAT2Q7Z6V5 191 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms