RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 TPX2Q9ULW0 747 aaKnown RBP11.68□□□□□ -0.54
RTN4-211ENST00000438462 PRRC2CQ9Y520 2896 aaKnown RBP11.67□□□□□ -0.54
RTN4-211ENST00000438462 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 TARSL2A2RTX5 802 aaKnown RBP11.67□□□□□ -0.54
RTN4-211ENST00000438462 F8VP50 259 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 CLDN3O15551 220 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 PRICKLE3O43900 615 aaPredicted RBP11.67□□□□□ -0.54
RTN4-211ENST00000438462 KRTAP10-9P60411 292 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 PSMC1P62191 440 aaKnown RBP11.67□□□□□ -0.54
RTN4-211ENST00000438462 AKAP17AQ02040 695 aaKnown RBP11.67□□□□□ -0.54
RTN4-211ENST00000438462 ZRSR2Q15696 482 aaKnown RBP11.67□□□□□ -0.54
RTN4-211ENST00000438462 BMT2Q1RMZ1 405 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 C14orf28Q4W4Y0 310 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 ATP1A1-AS1Q5TC04 95 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 FYB2Q5VWT5 728 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 CEP135Q66GS9 1140 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 PRPF39Q86UA1 669 aaKnown RBP11.67□□□□□ -0.54
RTN4-211ENST00000438462 BLIDQ8IZY5 108 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 OR6B3Q8NGW1 331 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 OR14C36Q8NHC7 312 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 NAT6Q93015 286 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 GFM1Q96RP9 751 aaKnown RBP11.67□□□□□ -0.54
RTN4-211ENST00000438462 OMDQ99983 421 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 CALN1Q9BXU9 219 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 TRIM8Q9BZR9 551 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 GGT7Q9UJ14 662 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 NAP1L2Q9ULW6 460 aaPredicted RBP11.67□□□□□ -0.54
RTN4-211ENST00000438462 CLEC4EQ9ULY5 219 aa11.67□□□□□ -0.54
RTN4-211ENST00000438462 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
RTN4-211ENST00000438462 SLC12A8A0AV02 714 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 RIOK3O14730 519 aaKnown RBP11.66□□□□□ -0.54
RTN4-211ENST00000438462 ATP2C2O75185 946 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 SPATA31C1P0DKV0 1188 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 GUCY2CP25092 1073 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 ITGA3P26006 1051 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 RNASE9P60153 205 aaKnown RBP11.66□□□□□ -0.54
RTN4-211ENST00000438462 CST6Q15828 149 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 ECM1Q16610 540 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 DEFB133Q30KQ1 61 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 NEK8Q86SG6 692 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 PDZD8Q8NEN9 1154 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 FAM174AQ8TBP5 190 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 FBXO32Q969P5 355 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 TCEANC2Q96MN5 208 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 TMEM74Q96NL1 305 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 TSPAN18Q96SJ8 248 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 LNPKQ9C0E8 428 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 MTG2Q9H4K7 406 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 DMTF1Q9Y222 760 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 KCNMB2Q9Y691 235 aa11.66□□□□□ -0.54
RTN4-211ENST00000438462 TBC1D3DA0A087WVF3 549 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 TBC1D3IA0A087WXS9 549 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 TBC1D3EA0A087X179 549 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 TBC1D3KA0A087X1G2 549 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 TBC1D3FA6NER0 549 aaPredicted RBP11.65□□□□□ -0.54
RTN4-211ENST00000438462 TBC1D3LB9A6J9 549 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 BAG4O95429 457 aaKnown RBP11.65□□□□□ -0.54
RTN4-211ENST00000438462 TBC1D3HP0C7X1 549 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 TUBP50607 506 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 CYP27A1Q02318 531 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 RAD51AP2Q09MP3 1159 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 TBC1D3GQ6DHY5 549 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 TBC1D3CQ6IPX1 549 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 FAM171BQ6P995 826 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 TBC1D3Q8IZP1 549 aaPredicted RBP11.65□□□□□ -0.54
RTN4-211ENST00000438462 CACNA2D3Q8IZS8 1091 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 PTPRN2Q92932 1015 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 ZNF560Q96MR9 790 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 MYOCQ99972 504 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 CDH19Q9H159 772 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 CYP4F12Q9HCS2 524 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 KMT5AQ9NQR1 393 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 DNAJC28Q9NX36 388 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 LUZP4Q9P127 313 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 SALL4Q9UJQ4 1053 aa11.65□□□□□ -0.54
RTN4-211ENST00000438462 CAPN5O15484 640 aaPredicted RBP11.64□□□□□ -0.55
RTN4-211ENST00000438462 FAM189A1O60320 539 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 ADRB2P07550 413 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 FECHP22830 423 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 PCSK1P29120 753 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 NOS2P35228 1153 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 UGT1A3P35503 534 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 ARSDP51689 593 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 COPB1P53618 953 aaKnown RBP11.64□□□□□ -0.55
RTN4-211ENST00000438462 LTBQ06643 244 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 STRN3Q13033 797 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 NPY5RQ15761 445 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 TMEM164Q5U3C3 297 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 PIK3AP1Q6ZUJ8 805 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 SLC35F3Q8IY50 421 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 AADATQ8N5Z0 425 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 OVCA2Q8WZ82 227 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 KLF16Q9BXK1 252 aaPredicted RBP11.64□□□□□ -0.55
RTN4-211ENST00000438462 SLC26A6Q9BXS9 759 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 CRTAC1Q9NQ79 661 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 SH3GLB2Q9NR46 395 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 CHORDC1Q9UHD1 332 aaPredicted RBP11.64□□□□□ -0.55
RTN4-211ENST00000438462 CYTH4Q9UIA0 394 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 PCDHA12Q9UN75 941 aa11.64□□□□□ -0.55
RTN4-211ENST00000438462 PLA2G4CQ9UP65 541 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms