RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 VN1R5Q7Z5H4 357 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 CHPFQ8IZ52 775 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 C12orf66Q96MD2 445 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 NMRAL1Q9HBL8 299 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 ERVV-1B6SEH8 477 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 PRR5LQ6MZQ0 368 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 FBXW8Q8N3Y1 598 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 MND1Q9BWT6 205 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 SP140LQ9H930 580 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 SPAG4Q9NPE6 437 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 PRDM5Q9NQX1 630 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 CPDO75976 1380 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 PLOD3O60568 738 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 IL6STP40189 918 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 S100A12P80511 92 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 MGAT5Q09328 741 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 HKDC1Q2TB90 917 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 FAM92BQ6ZTR7 304 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 SPPL2AQ8TCT8 520 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 PABPC5Q96DU9 382 aaKnown RBP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 CAB39LQ9H9S4 337 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 KIAA1257Q9ULG3 409 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 ASS1P00966 412 aaKnown RBP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 CHRNGP07510 517 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 NR2C2P49116 596 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 RNF19BQ6ZMZ0 732 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 EZH1Q92800 747 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-209ENST00000437951 CCDC115Q96NT0 180 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 BCL2L14Q9BZR8 327 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 RAD18Q9NS91 495 aa11.78□□□□□ -0.52
PTCH1-209ENST00000437951 EPN2O95208 641 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 LSM8O95777 96 aaKnown RBP11.77□□□□□ -0.52
PTCH1-209ENST00000437951 SQLEQ14534 574 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 IL31Q6EBC2 164 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 C11orf74Q86VG3 221 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 TBC1D13Q9NVG8 400 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 RGSL1A5PLK6 1076 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 REM1O75628 298 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 PCSK1P29120 753 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 PNPLA4P41247 253 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 PARP6Q2NL67 630 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 PRCCQ92733 491 aaPredicted RBP11.77□□□□□ -0.52
PTCH1-209ENST00000437951 TRMT13Q9NUP7 481 aaKnown RBP11.77□□□□□ -0.52
PTCH1-209ENST00000437951 FAM49BQ9NUQ9 324 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 UPB1Q9UBR1 384 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 TRIM10Q9UDY6 481 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 PRPF19Q9UMS4 504 aaKnown RBP11.77□□□□□ -0.52
PTCH1-209ENST00000437951 CROCC2H7BZ55 1655 aa11.77□□□□□ -0.52
PTCH1-209ENST00000437951 USP17L3A6NCW0 530 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 USP17L4A6NCW7 530 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 RGS14O43566 566 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 CCNCP24863 283 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 DYNLL1P63167 89 aaKnown RBP11.77□□□□□ -0.53
PTCH1-209ENST00000437951 TAF5Q15542 800 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 PCSK7Q16549 785 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 USP17L1Q7RTZ2 530 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 TTC29Q8NA56 475 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-209ENST00000437951 PRKD2Q9BZL6 878 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 QTRT2Q9H974 415 aaKnown RBP11.77□□□□□ -0.53
PTCH1-209ENST00000437951 A1CFQ9NQ94 594 aaKnown RBP11.77□□□□□ -0.53
PTCH1-209ENST00000437951 MFHAS1Q9Y4C4 1052 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 PCDHA10Q9Y5I2 948 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 MRASO14807 208 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 CYP2E1P05181 493 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-209ENST00000437951 ANPEPP15144 967 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 TMC3Q7Z5M5 1100 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 OR56A4Q8NGH8 313 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 CYP2C9P11712 490 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 NECAB2Q7Z6G3 386 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 CLPBQ9H078 707 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 NAALADL1Q9UQQ1 740 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 ALDH3A2P51648 485 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 PERM1Q5SV97 790 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 ZNF75CPQ92670 426 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-209ENST00000437951 PLEKHF1Q96S99 279 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 YME1L1Q96TA2 773 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 LNPEPQ9UIQ6 1025 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 RPL3P39023 403 aaKnown RBP11.77□□□□□ -0.53
PTCH1-209ENST00000437951 FMR1Q06787 632 aaKnown RBP eCLIP11.77□□□□□ -0.532e-7■■■■■ 26.8
PTCH1-209ENST00000437951 MPP3Q13368 585 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 ZMYND11Q15326 602 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 NR6A1Q15406 480 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 GALNT18Q6P9A2 607 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 RAET1EQ8TD07 263 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 DPF2Q92785 391 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 AIFM2Q9BRQ8 373 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 MTG1Q9BT17 334 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-209ENST00000437951 MED28Q9H204 178 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 C17orf75Q9HAS0 396 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 UBQLN1Q9UMX0 589 aaKnown RBP11.77□□□□□ -0.53
PTCH1-209ENST00000437951 SPEF1Q9Y4P9 236 aa11.77□□□□□ -0.53
PTCH1-209ENST00000437951 NEDD4P46934 1319 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 TSPAN4O14817 238 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 IFNA16P05015 189 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 FGRP09769 529 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 CASP1P29466 404 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ADAM17P78536 824 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms