RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PMS2P3Q13401 168 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 DNASE1L3Q13609 305 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 TAF5Q15542 800 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 WDR44Q5JSH3 913 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 GPATCH4Q5T3I0 446 aaKnown RBP7.65□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF618Q5T7W0 954 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 ANGEL2Q5VTE6 544 aaKnown RBP7.65□□□□□ -1.18
CPSF6-202ENST00000435070 SLC9A9Q8IVB4 645 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 EMC1Q8N766 993 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 NLRP4Q96MN2 994 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 COG8Q96MW5 612 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 FAM213AQ9BRX8 229 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 RPF2Q9H7B2 306 aaKnown RBP7.65□□□□□ -1.18
CPSF6-202ENST00000435070 SFMBT1Q9UHJ3 866 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 TNS2Q63HR2 1409 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 ME2P23368 584 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 JAK1P23458 1154 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 EEF1B2P24534 225 aaKnown RBP7.65□□□□□ -1.19
CPSF6-202ENST00000435070 PIK3R1P27986 724 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 ABCG1P45844 678 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 GSSP48637 474 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 SLFN13Q68D06 897 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 UBR7Q8N806 425 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 ZNF781Q8N8C0 355 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 FRMD8Q9BZ67 464 aaPredicted RBP7.65□□□□□ -1.19
CPSF6-202ENST00000435070 TMEM206Q9H813 350 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 PNPLA3Q9NST1 481 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 NCKIPSDQ9NZQ3 722 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 FETUBQ9UGM5 382 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 TOR1BO14657 336 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 ZBTB24O43167 697 aaPredicted RBP7.65□□□□□ -1.19
CPSF6-202ENST00000435070 FGF3P11487 239 aaPredicted RBP7.65□□□□□ -1.19
CPSF6-202ENST00000435070 CPA3P15088 417 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 ADAM17P78536 824 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 FSCBQ5H9T9 825 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 FAM102BQ5T8I3 360 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 FBXO11Q86XK2 927 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 SNX31Q8N9S9 440 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 CYGBQ8WWM9 190 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 SLC2A11Q9BYW1 496 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 PARVAQ9NVD7 372 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 TTLL3Q9Y4R7 772 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 TEX264Q9Y6I9 313 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 DLEC1Q9Y238 1755 aa7.65□□□□□ -1.19
CPSF6-202ENST00000435070 ASTN2O75129 1339 aaPredicted RBP7.64□□□□□ -1.19
CPSF6-202ENST00000435070 FAM149AA5PLN7 773 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 M0QZ92 97 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 TIPRLO75663 272 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 HSPA13P48723 471 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 INPP1P49441 399 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 NOMO3P69849 1222 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 ZNF252P-AS1Q0IIN9 211 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 RALGDSQ12967 914 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 MMRN1Q13201 1228 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 BCL2A1Q16548 175 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 ZBED5Q49AG3 693 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 INTS5Q6P9B9 1019 aaKnown RBP7.64□□□□□ -1.19
CPSF6-202ENST00000435070 TICAM1Q8IUC6 712 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 SOX17Q9H6I2 414 aaPredicted RBP7.64□□□□□ -1.19
CPSF6-202ENST00000435070 WDR41Q9HAD4 459 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 TMEM8AQ9HCN3 771 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 SLC27A5Q9Y2P5 690 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 FIS1Q9Y3D6 152 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 USP54Q70EL1 1684 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 A0A087WXM4 84 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 ARP10275 920 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 DPP6P42658 865 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 BFSP2Q13515 415 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 NFIL3Q16649 462 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 DHRS4L2Q6PKH6 230 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 AMNQ9BXJ7 453 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 EPS8L2Q9H6S3 715 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 PALMDQ9NP74 551 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 CCPG1Q9ULG6 757 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 ATP11BQ9Y2G3 1177 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 AP4S1Q9Y587 144 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 IQCA1LA6NCM1 817 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 E7ESA3 106 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 NRP1O14786 923 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 IL1BP01584 269 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 RALBP11234 206 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 FOSL2P15408 326 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 PSMA2P25787 234 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 GRM5P41594 1212 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 NEK2P51955 445 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 PPP4CP60510 307 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 MFSD14BQ5SR56 506 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 MBLAC2Q68D91 279 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 CADM3Q8N126 398 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 CHPT1Q8WUD6 406 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 POLE4Q9NR33 117 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 VPS45Q9NRW7 570 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 ANKRD12Q6UB98 2062 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 HMX2A2RU54 273 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 AKAP10O43572 662 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 UFL1O94874 794 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 ESRRBO95718 433 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 SNHG28P0DPA3 235 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 CCR10P46092 362 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 BLVRAP53004 296 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms