RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ZNF276Q8N554 614 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 REPS1Q96D71 796 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 NFKBIZQ9BYH8 718 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 DHRS7Q9Y394 339 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 MGAT5BQ3V5L5 792 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 LRRC70Q7Z2Q7 622 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 EMC1Q8N766 993 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 ENTPD4Q9Y227 616 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 PCDHB2Q9Y5E7 798 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 CCNKO75909 580 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 IL18RAPO95256 599 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 THRBP10828 461 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 TMEM132BQ14DG7 1078 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 RP9Q8TA86 221 aaKnown RBP16.8■□□□□ 0.28
RIF1-204ENST00000430328 ZSCAN18Q8TBC5 510 aaPredicted RBP16.8■□□□□ 0.28
RIF1-204ENST00000430328 ZNF668Q96K58 619 aaPredicted RBP16.8■□□□□ 0.28
RIF1-204ENST00000430328 CUEDC1Q9NWM3 386 aaPredicted RBP16.8■□□□□ 0.28
RIF1-204ENST00000430328 TOP3BO95985 862 aaKnown RBP16.8■□□□□ 0.28
RIF1-204ENST00000430328 HKDC1Q2TB90 917 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 PEX5LQ8IYB4 626 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 XKR8Q9H6D3 395 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 FAM240BA0A1B0GVZ2 78 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 CYP2A7P20853 494 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 FAPQ12884 760 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.8■□□□□ 0.28
RIF1-204ENST00000430328 SHOC2Q9UQ13 582 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 ERI2A8K979 691 aaKnown RBP16.8■□□□□ 0.28
RIF1-204ENST00000430328 METTL18O95568 372 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 GLP2RO95838 553 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 ERCC2P18074 760 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 PPP2R2BQ00005 443 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 KCNV1Q6PIU1 500 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 GPAMQ9HCL2 828 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 EPHB2P29323 1055 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 PLD1Q13393 1074 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 TNFAIP8L1Q8WVP5 186 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 PIGKQ92643 395 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 KDM5BQ9UGL1 1544 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 SLC25A12O75746 678 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 SLC11A2P49281 568 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 MFSD14CQ5VZR4 134 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 MFSD7Q6UXD7 560 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 LRRC69Q6ZNQ3 347 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 HNRNPLLQ8WVV9 542 aaKnown RBP16.79■□□□□ 0.28
RIF1-204ENST00000430328 DYNLL2Q96FJ2 89 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 INTS10Q9NVR2 710 aaKnown RBP16.79■□□□□ 0.28
RIF1-204ENST00000430328 CKLFQ9UBR5 152 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 DENND5BQ6ZUT9 1274 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 KAT2BQ92831 832 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 MMP19Q99542 508 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 OSGEPL1Q9H4B0 414 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 GPN3Q9UHW5 284 aaPredicted RBP16.79■□□□□ 0.28
RIF1-204ENST00000430328 SNAP91O60641 907 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 UCHL3P15374 230 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 AP3S2P59780 193 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 PRKAA1Q13131 559 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 CCDC167Q9P0B6 97 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 NAGPAQ9UK23 515 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 FAM172BPA6NC97 362 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 ETS1P14921 441 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 UGT1A5P35504 534 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 MAPK7Q13164 816 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 PRMT3O60678 531 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 CBX3Q13185 183 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 INTS11Q5TA45 600 aaKnown RBP16.79■□□□□ 0.28
RIF1-204ENST00000430328 ZNF540Q8NDQ6 660 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 ACOT9Q9Y305 439 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 MYH11P35749 1972 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 GP5P40197 560 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 FRG1Q14331 258 aaKnown RBP16.79■□□□□ 0.28
RIF1-204ENST00000430328 FAM98CQ17RN3 349 aaKnown RBP16.79■□□□□ 0.28
RIF1-204ENST00000430328 UCMAQ8WVF2 138 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 GORASP1Q9BQQ3 440 aa16.79■□□□□ 0.28
RIF1-204ENST00000430328 PRKCBP05771 671 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 MED28Q9H204 178 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 PLIN3O60664 434 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 KCNH1O95259 989 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 NPY2RP49146 381 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 FAM136AQ96C01 138 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 KATNAL1Q9BW62 490 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 BMP7P18075 431 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 PKN1Q16512 942 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 OR8H3Q8N146 312 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 ANKRD7Q92527 254 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 ART5Q96L15 291 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 SP140LQ9H930 580 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 JPH1Q9HDC5 661 aaPredicted RBP16.78■□□□□ 0.28
RIF1-204ENST00000430328 PDGFCQ9NRA1 345 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 THAP1Q9NVV9 213 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 ALG6Q9Y672 507 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 ARHGEF10O15013 1369 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 UHRF1BP1LA0JNW5 1464 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 IL18Q14116 193 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 FAM187BQ17R55 369 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 TDRD10Q5VZ19 366 aaKnown RBP16.78■□□□□ 0.28
RIF1-204ENST00000430328 CYP2R1Q6VVX0 501 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 SKA1Q96BD8 255 aa16.78■□□□□ 0.28
RIF1-204ENST00000430328 ABI2Q9NYB9 513 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms