RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 SIX5Q8N196 739 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 CFAP52Q8N1V2 620 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 ARFGAP1Q8N6T3 406 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 NAT16Q8N8M0 369 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 ZNF557Q8N988 423 aaPredicted RBP15.65■□□□□ 0.1
VARS2-203ENST00000428017 TPCN2Q8NHX9 752 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 HSPH1Q92598 858 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 EDAQ92838 391 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 PRMT1Q99873 361 aaKnown RBP15.65■□□□□ 0.1
VARS2-203ENST00000428017 DHX35Q9H5Z1 703 aaKnown RBP15.65■□□□□ 0.1
VARS2-203ENST00000428017 LZTFL1Q9NQ48 299 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 PLK2Q9NYY3 685 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 STIM2Q9P246 746 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 TRIM10Q9UDY6 481 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 OR12D3Q9UGF7 316 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 GUCA1BQ9UMX6 200 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 MRPS17Q9Y2R5 130 aaKnown RBP15.65■□□□□ 0.1
VARS2-203ENST00000428017 SNX10Q9Y5X0 201 aa15.65■□□□□ 0.1
VARS2-203ENST00000428017 HELZP42694 1942 aaKnown RBP15.64■□□□□ 0.09
VARS2-203ENST00000428017 E9PAM4 449 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 STK25O00506 426 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 PENKP01210 267 aaPredicted RBP15.64■□□□□ 0.09
VARS2-203ENST00000428017 KRT7P08729 469 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 TNNT1P13805 278 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 RPS24P62847 133 aaKnown RBP15.64■□□□□ 0.09
VARS2-203ENST00000428017 CDH18Q13634 790 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 KRT81Q14533 505 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 SMTNL2Q2TAL5 461 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 KCNT1Q5JUK3 1230 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 FYB2Q5VWT5 728 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 RWDD4Q6NW29 188 aaKnown RBP15.64■□□□□ 0.09
VARS2-203ENST00000428017 ZNF852Q6ZMS4 543 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 NUDT18Q6ZVK8 323 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 SYCE1Q8N0S2 351 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 CARNMT1Q8N4J0 409 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 RNF10Q8N5U6 811 aaKnown RBP15.64■□□□□ 0.09
VARS2-203ENST00000428017 TEKT4Q8WW24 435 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 FAM3CQ92520 227 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 PRICKLE1Q96MT3 831 aaPredicted RBP15.64■□□□□ 0.09
VARS2-203ENST00000428017 SNRNP25Q9BV90 132 aaKnown RBP15.64■□□□□ 0.09
VARS2-203ENST00000428017 MFSD1Q9H3U5 465 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.64■□□□□ 0.09
VARS2-203ENST00000428017 DNAJC17Q9NVM6 304 aaKnown RBP15.64■□□□□ 0.09
VARS2-203ENST00000428017 GPATCH2LQ9NWQ4 482 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 DEC1Q9P2X7 70 aa15.64■□□□□ 0.09
VARS2-203ENST00000428017 H0Y626 953 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 I6L893 689 aaPredicted RBP15.63■□□□□ 0.09
VARS2-203ENST00000428017 TNFRSF10AO00220 468 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 DAPK3O43293 454 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 CREB3O43889 395 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 CACNG3O60359 315 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 TCF4P15884 667 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 COMTP21964 271 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 L1CAMP32004 1257 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 NRG1Q02297 640 aaPredicted RBP15.63■□□□□ 0.09
VARS2-203ENST00000428017 SLC25A11Q02978 314 aaKnown RBP15.63■□□□□ 0.09
VARS2-203ENST00000428017 PPP6R3Q5H9R7 873 aaPredicted RBP15.63■□□□□ 0.09
VARS2-203ENST00000428017 GRAMD4Q6IC98 578 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 C14orf80Q86SX3 495 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 MFN1Q8IWA4 741 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 RHOT1Q8IXI2 618 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 KIAA1524Q8TCG1 905 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 CD101Q93033 1021 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 TBC1D31Q96DN5 1066 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 ALS2CR12Q96Q35 445 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 PEBP4Q96S96 227 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 PNKPQ96T60 521 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 P2RY13Q9BPV8 354 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 SLC2A11Q9BYW1 496 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 ZYG11BQ9C0D3 744 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 SALL4Q9UJQ4 1053 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.63■□□□□ 0.09
VARS2-203ENST00000428017 ALG6Q9Y672 507 aa15.63■□□□□ 0.09
VARS2-203ENST00000428017 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.62■□□□□ 0.09
VARS2-203ENST00000428017 A0A0U1RQJ8 604 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 A0A1B0GVM2 712 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 TCAF2A6NFQ2 919 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 EEF2KO00418 725 aaKnown RBP15.62■□□□□ 0.09
VARS2-203ENST00000428017 GFRA2O00451 464 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 TULP3O75386 442 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 CLDN11O75508 207 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 MOCS3O95396 460 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 RARAP10276 462 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 IL1R2P27930 398 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 HOXD9P28356 352 aaPredicted RBP15.62■□□□□ 0.09
VARS2-203ENST00000428017 HTR7P34969 479 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 ARL4AP40617 200 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 EIF2DP41214 584 aaKnown RBP15.62■□□□□ 0.09
VARS2-203ENST00000428017 DGKGP49619 791 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 SGSHP51688 502 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 ZNF135P52742 658 aaPredicted RBP15.62■□□□□ 0.09
VARS2-203ENST00000428017 CDH4P55283 916 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 TAS2R40P59535 323 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 TPI1P60174 286 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 GRSF1Q12849 480 aaKnown RBP eCLIP15.62■□□□□ 0.095e-13■■□□□ 11.5
VARS2-203ENST00000428017 ZNF177Q13360 481 aaPredicted RBP15.62■□□□□ 0.09
VARS2-203ENST00000428017 ZNF662Q6ZS27 426 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 TRIM67Q6ZTA4 783 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 CHST9Q7L1S5 443 aa15.62■□□□□ 0.09
VARS2-203ENST00000428017 POLNQ7Z5Q5 900 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms