RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 WFDC5Q8TCV5 224 aa18.66■□□□□ 0.58
HERC3-205ENST00000426683 SYN2Q92777 582 aaPredicted RBP18.66■□□□□ 0.58
HERC3-205ENST00000426683 NKD2Q969F2 451 aaPredicted RBP18.66■□□□□ 0.58
HERC3-205ENST00000426683 ACOX2Q99424 681 aa18.66■□□□□ 0.58
HERC3-205ENST00000426683 PRMT1Q99873 361 aaKnown RBP18.66■□□□□ 0.58
HERC3-205ENST00000426683 TKTL2Q9H0I9 626 aa18.66■□□□□ 0.58
HERC3-205ENST00000426683 ABCB8Q9NUT2 735 aa18.66■□□□□ 0.58
HERC3-205ENST00000426683 TMEM51Q9NW97 253 aa18.66■□□□□ 0.58
HERC3-205ENST00000426683 ARHGEF38Q9NXL2 777 aa18.66■□□□□ 0.58
HERC3-205ENST00000426683 PAXBP1Q9Y5B6 917 aa18.66■□□□□ 0.58
HERC3-205ENST00000426683 HS3ST4Q9Y661 456 aa18.66■□□□□ 0.58
HERC3-205ENST00000426683 CACNA1HO95180 2353 aa18.66■□□□□ 0.58
HERC3-205ENST00000426683 C2CD4BA6NLJ0 364 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 DDX3XO00571 662 aaKnown RBP eCLIP18.65■□□□□ 0.58
HERC3-205ENST00000426683 PAGE1O75459 146 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 HNRNPLP14866 589 aaKnown RBP eCLIP18.65■□□□□ 0.58
HERC3-205ENST00000426683 RRM1P23921 792 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 NTSR1P30989 418 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 CASP14P31944 242 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 ATP11AP98196 1134 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 CCDC14Q49A88 953 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 HGSNATQ68CP4 663 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 SDE2Q6IQ49 451 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 TMEM92Q6UXU6 159 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 BNIPLQ7Z465 357 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 WDR5BQ86VZ2 330 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 CCDC117Q8IWD4 279 aaPredicted RBP18.65■□□□□ 0.58
HERC3-205ENST00000426683 CHPFQ8IZ52 775 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 CARNMT1Q8N4J0 409 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 ZNF557Q8N988 423 aaPredicted RBP18.65■□□□□ 0.58
HERC3-205ENST00000426683 UCMAQ8WVF2 138 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 CIPCQ9C0C6 399 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 SEMA4AQ9H3S1 761 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 ANLNQ9NQW6 1124 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 ELOVL2Q9NXB9 296 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 GGA2Q9UJY4 613 aa18.65■□□□□ 0.58
HERC3-205ENST00000426683 BZW2Q9Y6E2 419 aaKnown RBP18.65■□□□□ 0.58
HERC3-205ENST00000426683 TCRBV5S1A1TA0A578 114 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 SIGLEC16A6NMB1 481 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 LUC7L3O95232 432 aaKnown RBP18.64■□□□□ 0.57
HERC3-205ENST00000426683 PABPC1P11940 636 aaKnown RBP18.64■□□□□ 0.57
HERC3-205ENST00000426683 HOXB2P14652 356 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 CD70P32970 193 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 RFC1P35251 1148 aaPredicted RBP18.64■□□□□ 0.57
HERC3-205ENST00000426683 GGCXP38435 758 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 DGKEP52429 567 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 CDH18Q13634 790 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 AUHQ13825 339 aaKnown RBP18.64■□□□□ 0.57
HERC3-205ENST00000426683 EIF4HQ15056 248 aaKnown RBP18.64■□□□□ 0.57
HERC3-205ENST00000426683 CDO1Q16878 200 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 C15orf59Q2T9L4 293 aaPredicted RBP18.64■□□□□ 0.57
HERC3-205ENST00000426683 RABGAP1LQ5R372 815 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 TMEM215Q68D42 235 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 SPECC1LQ69YQ0 1117 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 FBXL22Q6P050 247 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 WDR59Q6PJI9 974 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 CHST9Q7L1S5 443 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 DNAAF5Q86Y56 855 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 AHI1Q8N157 1196 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.64■□□□□ 0.57
HERC3-205ENST00000426683 FIBINQ8TAL6 211 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 WFIKKN2Q8TEU8 576 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 VCPIP1Q96JH7 1222 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 SIK2Q9H0K1 926 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 POLMQ9NP87 494 aaPredicted RBP18.64■□□□□ 0.57
HERC3-205ENST00000426683 CACNA2D2Q9NY47 1150 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 VANGL2Q9ULK5 521 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 ATG2BQ96BY7 2078 aa18.64■□□□□ 0.57
HERC3-205ENST00000426683 CCDC163A0A0D9SF12 145 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 H0Y626 953 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 I6L893 689 aaPredicted RBP18.63■□□□□ 0.57
HERC3-205ENST00000426683 AXIN1O15169 862 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 TIMM44O43615 452 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 ENDOD1O94919 500 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 SERPING1P05155 500 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 GZMAP12544 262 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 GPD1P21695 349 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 PTPN9P43378 593 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 MRE11P49959 708 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 LMAN2Q12907 356 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 SRSF5Q13243 272 aaKnown RBP18.63■□□□□ 0.57
HERC3-205ENST00000426683 TRIM14Q14142 442 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 RAB6CQ53S08 254 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 SH3PXD2AQ5TCZ1 1133 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 ANO7Q6IWH7 933 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 KIAA0907Q7Z7F0 614 aaPredicted RBP18.63■□□□□ 0.57
HERC3-205ENST00000426683 C14orf80Q86SX3 495 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 ALYREFQ86V81 257 aaKnown RBP18.63■□□□□ 0.57
HERC3-205ENST00000426683 FAM131BQ86XD5 332 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 VSTM4Q8IW00 320 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 SORCS1Q8WY21 1168 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 RPRD1AQ96P16 312 aaPredicted RBP18.63■□□□□ 0.57
HERC3-205ENST00000426683 MCEEQ96PE7 176 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.63■□□□□ 0.57
HERC3-205ENST00000426683 RAB6CQ9H0N0 254 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 TMPRSS4Q9NRS4 437 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 THAP10Q9P2Z0 257 aaPredicted RBP18.63■□□□□ 0.57
HERC3-205ENST00000426683 SNX10Q9Y5X0 201 aa18.63■□□□□ 0.57
HERC3-205ENST00000426683 ANKRD62A6NC57 917 aa18.62■□□□□ 0.57
HERC3-205ENST00000426683 PRR23AA6NEV1 266 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms