RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 P2RY11Q96G91 374 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 FAM83CQ9BQN1 747 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 TRMT61BQ9BVS5 477 aaKnown RBP16.24■□□□□ 0.19
DDX55-203ENST00000421670 TBC1D14Q9P2M4 693 aa16.24■□□□□ 0.19
DDX55-203ENST00000421670 E9PAM4 449 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 ENC1O14682 589 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 SLC9A3R1O14745 358 aaPredicted RBP16.23■□□□□ 0.19
DDX55-203ENST00000421670 CREB3O43889 395 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 LRIG2O94898 1065 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 BMP1P13497 986 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 CTNNA2P26232 953 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 L1CAMP32004 1257 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 CDH6P55285 790 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 GNG11P61952 73 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 SEMA3BQ13214 749 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 MTA1Q13330 715 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 DPYSL2Q16555 572 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 ARTNQ5T4W7 220 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 FBXL22Q6P050 247 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 ZSCAN30Q86W11 494 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 PSTKQ8IV42 348 aaKnown RBP16.23■□□□□ 0.19
DDX55-203ENST00000421670 CFAP52Q8N1V2 620 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 CPXM2Q8N436 756 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 RAPGEF5Q92565 580 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 ALG3Q92685 438 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 IGSF8Q969P0 613 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 HES6Q96HZ4 224 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 RPRD1AQ96P16 312 aaPredicted RBP16.23■□□□□ 0.19
DDX55-203ENST00000421670 WDR24Q96S15 920 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 OSBPL2Q9H1P3 480 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 PCDH18Q9HCL0 1135 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 HPS4Q9NQG7 708 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 IGSF9Q9P2J2 1179 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 NEU3Q9UQ49 428 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 PCDHA3Q9Y5H8 950 aa16.23■□□□□ 0.19
DDX55-203ENST00000421670 CCDC66A2RUB6 948 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 LRRD1A4D1F6 860 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 OTOL1A6NHN0 477 aaPredicted RBP16.22■□□□□ 0.19
DDX55-203ENST00000421670 CHADO15335 359 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 DDX3YO15523 660 aaKnown RBP16.22■□□□□ 0.19
DDX55-203ENST00000421670 CYP17A1P05093 508 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 GOT1P17174 413 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 CHKAP35790 457 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 RPS24P62847 133 aaKnown RBP16.22■□□□□ 0.19
DDX55-203ENST00000421670 KRT81Q14533 505 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 LY6G5CQ5SRR4 150 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 MANEALQ5VSG8 457 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 TMEM25Q86YD3 366 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 ZNF683Q8IZ20 524 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 ADGRG2Q8IZP9 1017 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 SLC44A3Q8N4M1 653 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 KIAA1958Q8N8K9 716 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 TTC8Q8TAM2 541 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 ATP2A3Q93084 1043 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 OTUB2Q96DC9 234 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 C1orf74Q96LT6 269 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 C16orf45Q96MC5 204 aaPredicted RBP16.22■□□□□ 0.19
DDX55-203ENST00000421670 EPAS1Q99814 870 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 DDX50Q9BQ39 737 aaKnown RBP16.22■□□□□ 0.19
DDX55-203ENST00000421670 CALN1Q9BXU9 219 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 BRD9Q9H8M2 597 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 SPHK2Q9NRA0 654 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 PLK2Q9NYY3 685 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 GTSE1Q9NYZ3 720 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.22■□□□□ 0.19
DDX55-203ENST00000421670 CHD5Q8TDI0 1954 aa16.22■□□□□ 0.19
DDX55-203ENST00000421670 MIF4GDA9UHW6 222 aaKnown RBP16.21■□□□□ 0.19
DDX55-203ENST00000421670 NEDD8-MDP1E9PL57 170 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 ARNTLO00327 626 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 GFRA2O00451 464 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 NARSO43776 548 aaKnown RBP16.21■□□□□ 0.19
DDX55-203ENST00000421670 PEX5P50542 639 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 ARSEP51690 589 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 MMRN1Q13201 1228 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 DPYSL3Q14195 570 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 PDGFRLQ15198 375 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 RWDD4Q6NW29 188 aaKnown RBP16.21■□□□□ 0.19
DDX55-203ENST00000421670 RHBDF2Q6PJF5 856 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 KATNAL2Q8IYT4 538 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 UBL4BQ8N7F7 174 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 KCTD6Q8NC69 237 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 IRF7Q92985 503 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 NXPE3Q969Y0 559 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 RNF25Q96BH1 459 aaPredicted RBP16.21■□□□□ 0.19
DDX55-203ENST00000421670 PSMB7Q99436 277 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 TLR10Q9BXR5 811 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 DDX56Q9NY93 547 aaKnown RBP16.21■□□□□ 0.19
DDX55-203ENST00000421670 MPP6Q9NZW5 540 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 CWC15Q9P013 229 aaKnown RBP16.21■□□□□ 0.19
DDX55-203ENST00000421670 NYNRINQ9P2P1 1898 aaKnown RBP16.21■□□□□ 0.19
DDX55-203ENST00000421670 NUP205Q92621 2012 aa16.21■□□□□ 0.19
DDX55-203ENST00000421670 C3orf70A6NLC5 250 aaPredicted RBP16.21■□□□□ 0.18
DDX55-203ENST00000421670 EEF2KO00418 725 aaKnown RBP16.21■□□□□ 0.18
DDX55-203ENST00000421670 FANCGO15287 622 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 TBL1XO60907 577 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 CNTN5O94779 1100 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 NFATC1O95644 943 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 ATP1A1P05023 1023 aaKnown RBP16.21■□□□□ 0.18
DDX55-203ENST00000421670 KDELR1P24390 212 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 TPI1P60174 286 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms