RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 POLR3AO14802 1390 aaPredicted RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 PLEKHH1Q9ULM0 1364 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 REREQ9P2R6 1566 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 CCDC187A0A096LP49 1063 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 GXYLT2A0PJZ3 443 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 FSD2A1L4K1 749 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 TMEM232C9JQI7 657 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 CLIC1O00299 241 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 FYB1O15117 783 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 NBNO60934 754 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 PPFIA2O75334 1257 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 RPP40O75818 363 aaKnown RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 ACTL6BO94805 426 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 CER1O95813 267 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 MBPP02686 304 aaPredicted RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 HSP90AA1P07900 732 aaKnown RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 TPM2P07951 284 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 CHRM5P08912 532 aaPredicted RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 NHLRC4P0CG21 123 aaPredicted RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 ALADP13716 330 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 GYS1P13807 737 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 MATN1P21941 496 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 PPP2R1AP30153 589 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 GALNSP34059 522 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 JAK3P52333 1124 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 TERF1P54274 439 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 PROK1P58294 105 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 TUBA4AP68366 448 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 RAE1P78406 368 aaKnown RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 NHLH1Q02575 133 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 FOXO1Q12778 655 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 CBFBQ13951 182 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 KCNB1Q14721 858 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 LARS2Q15031 903 aaKnown RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 BTBD16Q32M84 506 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 TANGO2Q6ICL3 276 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 SULT6B1Q6IMI4 303 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 ACSM6Q6P461 480 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 ZNF788Q6ZQV5 615 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 PTF1AQ7RTS3 328 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 TRABD2AQ86V40 505 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 CHSY1Q86X52 802 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 CCDC117Q8IWD4 279 aaPredicted RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 MYCT1Q8N699 235 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 PNLDC1Q8NA58 520 aaKnown RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 SPATA5Q8NB90 893 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 OR52L2PQ8NGH6 319 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 HASPINQ8TF76 798 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 CCT6BQ92526 530 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 RSC1A1Q92681 617 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 KAZALD1Q96I82 304 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 FAR2Q96K12 515 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 ASB2Q96Q27 587 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 CRAMP1Q96RY5 1269 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 RTKNQ9BST9 563 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 PAGR1Q9BTK6 254 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 MAGEH1Q9H213 219 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 RWDD1Q9H446 243 aaPredicted RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 PANK3Q9H999 370 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 PPCSQ9HAB8 311 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 AGO4Q9HCK5 861 aaKnown RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 ABHD10Q9NUJ1 306 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 CHMP5Q9NZZ3 219 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 GRHPRQ9UBQ7 328 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 TET3O43151 1660 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 PPRC1Q5VV67 1664 aaKnown RBP3.01□□□□□ -1.93
VPS41-206ENST00000418457 DEPDC5O75140 1603 aa3.01□□□□□ -1.93
VPS41-206ENST00000418457 KANK1Q14678 1352 aa3□□□□□ -1.93
VPS41-206ENST00000418457 SPATA31A1Q5TZJ5 1347 aa3□□□□□ -1.93
VPS41-206ENST00000418457 CENPJQ9HC77 1338 aaPredicted RBP3□□□□□ -1.93
VPS41-206ENST00000418457 MANSC4A6NHS7 340 aaPredicted RBP3□□□□□ -1.93
VPS41-206ENST00000418457 LINC01548A6NM66 108 aa3□□□□□ -1.93
VPS41-206ENST00000418457 EFCAB8A8MWE9 144 aa3□□□□□ -1.93
VPS41-206ENST00000418457 TTC34A8MYJ7 566 aa3□□□□□ -1.93
VPS41-206ENST00000418457 KIF28PB7ZC32 967 aa3□□□□□ -1.93
VPS41-206ENST00000418457 TISP43B9A030 160 aa3□□□□□ -1.93
VPS41-206ENST00000418457 M0QZQ0 153 aa3□□□□□ -1.93
VPS41-206ENST00000418457 PPP6R2O75170 966 aa3□□□□□ -1.93
VPS41-206ENST00000418457 EIF3JO75822 258 aaKnown RBP3□□□□□ -1.93
VPS41-206ENST00000418457 PRKCGP05129 697 aa3□□□□□ -1.93
VPS41-206ENST00000418457 SLC3A2P08195 630 aaKnown RBP3□□□□□ -1.93
VPS41-206ENST00000418457 ATF7P17544 494 aaPredicted RBP3□□□□□ -1.93
VPS41-206ENST00000418457 DUSP1P28562 367 aa3□□□□□ -1.93
VPS41-206ENST00000418457 THBS4P35443 961 aa3□□□□□ -1.93
VPS41-206ENST00000418457 GRK6P43250 576 aa3□□□□□ -1.93
VPS41-206ENST00000418457 NANOS3P60323 173 aaKnown RBP3□□□□□ -1.93
VPS41-206ENST00000418457 WDR5P61964 334 aaKnown RBP3□□□□□ -1.93
VPS41-206ENST00000418457 AP2B1P63010 937 aa3□□□□□ -1.93
VPS41-206ENST00000418457 TFF2Q03403 129 aa3□□□□□ -1.93
VPS41-206ENST00000418457 SLC10A2Q12908 348 aaPredicted RBP3□□□□□ -1.93
VPS41-206ENST00000418457 PRKG1Q13976 671 aa3□□□□□ -1.93
VPS41-206ENST00000418457 CNGA3Q16281 694 aa3□□□□□ -1.93
VPS41-206ENST00000418457 ZNF569Q5MCW4 686 aa3□□□□□ -1.93
VPS41-206ENST00000418457 CC2D1BQ5T0F9 858 aaKnown RBP3□□□□□ -1.93
VPS41-206ENST00000418457 C20orf194Q5TEA3 1177 aa3□□□□□ -1.93
VPS41-206ENST00000418457 ANKRD40Q6AI12 368 aa3□□□□□ -1.93
VPS41-206ENST00000418457 LIN54Q6MZP7 749 aa3□□□□□ -1.93
VPS41-206ENST00000418457 RAB11FIP2Q7L804 512 aa3□□□□□ -1.93
VPS41-206ENST00000418457 SLC44A2Q8IWA5 706 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms