RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 C10orf142B7Z368 130 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 B8ZZF3 427 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 EXOC3O60645 756 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 P4HA1P13674 534 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 PFKFB1P16118 471 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 CD38P28907 300 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 AP3M2P53677 418 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 DLG4P78352 724 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 PDE4CQ08493 712 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 ILKQ13418 452 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 LY6DQ14210 128 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 SGSM1Q2NKQ1 1148 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 MPPE1Q53F39 396 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 SFMBT2Q5VUG0 894 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 ZNF776Q68DI1 518 aaPredicted RBP14.35□□□□□ -0.11
SSB-204ENST00000417292 NCEH1Q6PIU2 408 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 USP30Q70CQ3 517 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 CACTIN-AS1Q8N1I8 211 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.35□□□□□ -0.11
SSB-204ENST00000417292 RSPH9Q9H1X1 276 aaPredicted RBP14.35□□□□□ -0.11
SSB-204ENST00000417292 PABPC3Q9H361 631 aaKnown RBP14.35□□□□□ -0.11
SSB-204ENST00000417292 CUEDC2Q9H467 287 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 GDF3Q9NR23 364 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 AASDHPPTQ9NRN7 309 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 ABCB8Q9NUT2 735 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 ATP6V1DQ9Y5K8 247 aa14.35□□□□□ -0.11
SSB-204ENST00000417292 KIF20AO95235 890 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 ASS1P00966 412 aaKnown RBP14.34□□□□□ -0.11
SSB-204ENST00000417292 DLDP09622 509 aaKnown RBP14.34□□□□□ -0.11
SSB-204ENST00000417292 CKMT2P17540 419 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 ARRB1P49407 418 aaPredicted RBP14.34□□□□□ -0.11
SSB-204ENST00000417292 RHDQ02161 417 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 KCNC4Q03721 635 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 EHHADHQ08426 723 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 INCA1Q0VD86 236 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 CUL4BQ13620 913 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 ZACNQ401N2 412 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 PKDCCQ504Y2 493 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 ARHGAP40Q5TG30 622 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 MBLAC2Q68D91 279 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 KANSL1Q7Z3B3 1105 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 ZNF248Q8NDW4 579 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 GANCQ8TET4 914 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 WFIKKN2Q8TEU8 576 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 GOLGA1Q92805 767 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 SKA1Q96BD8 255 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 HIC2Q96JB3 615 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 DUSP16Q9BY84 665 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 NEUROG2Q9H2A3 272 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 FBXL12Q9NXK8 326 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 GGA2Q9UJY4 613 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 PCDHB1Q9Y5F3 818 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 UBE4BO95155 1302 aa14.34□□□□□ -0.11
SSB-204ENST00000417292 UBR5O95071 2799 aaPredicted RBP14.34□□□□□ -0.11
SSB-204ENST00000417292 YKT6O15498 198 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 ACTN4O43707 911 aaKnown RBP14.33□□□□□ -0.12
SSB-204ENST00000417292 PABPC1P11940 636 aaKnown RBP14.33□□□□□ -0.12
SSB-204ENST00000417292 C6P13671 934 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 CMA1P23946 247 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 RXRGP48443 463 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 SGSHP51688 502 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 NDUFA8P51970 172 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 TMPRSS3P57727 454 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 NXPH1P58417 271 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 AMPD3Q01432 767 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 TRIP4Q15650 581 aaPredicted RBP14.33□□□□□ -0.12
SSB-204ENST00000417292 PPP1R26Q5T8A7 1209 aaPredicted RBP14.33□□□□□ -0.12
SSB-204ENST00000417292 CNNM4Q6P4Q7 775 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 KDM7AQ6ZMT4 941 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 RSRC2Q7L4I2 434 aaKnown RBP14.33□□□□□ -0.12
SSB-204ENST00000417292 CEP57L1Q8IYX8 460 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 AHI1Q8N157 1196 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 WFDC5Q8TCV5 224 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 TTC9Q92623 222 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 PLD4Q96BZ4 506 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 MYO19Q96H55 970 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 C7orf25Q9BPX7 421 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 NT5C1AQ9BXI3 368 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 LRRC27Q9C0I9 530 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 SCAND2PQ9GZW5 306 aaPredicted RBP14.33□□□□□ -0.12
SSB-204ENST00000417292 GOLPH3LQ9H4A5 285 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 STRIP2Q9ULQ0 834 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 NCKAP1Q9Y2A7 1128 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 PTPN13Q12923 2485 aa14.33□□□□□ -0.12
SSB-204ENST00000417292 BSNQ9UPA5 3926 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 A0A1W2PP55 124 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 TLR4O00206 839 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 MID1O15344 667 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 SIN3BO75182 1162 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 RPN1P04843 607 aaKnown RBP14.32□□□□□ -0.12
SSB-204ENST00000417292 SLFN14P0C7P3 912 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 KRT10P13645 584 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 ACP1P24666 158 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 CD70P32970 193 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 PCBP4P57723 403 aaKnown RBP14.32□□□□□ -0.12
SSB-204ENST00000417292 YWHAGP61981 247 aaKnown RBP eCLIP14.32□□□□□ -0.12
SSB-204ENST00000417292 NUCB2P80303 420 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 PROX2Q3B8N5 592 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 SV2AQ7L0J3 742 aa14.32□□□□□ -0.12
SSB-204ENST00000417292 SPATS2Q86XZ4 545 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms