RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 RNF38Q9H0F5 515 aa14.15□□□□□ -0.14
CPNE1-209ENST00000415920 RXFP3Q9NSD7 469 aa14.15□□□□□ -0.14
CPNE1-209ENST00000415920 RRN3Q9NYV6 651 aa14.15□□□□□ -0.14
CPNE1-209ENST00000415920 ZMYM5Q9UJ78 669 aa14.15□□□□□ -0.14
CPNE1-209ENST00000415920 KIAA1549LQ6ZVL6 1849 aa14.15□□□□□ -0.14
CPNE1-209ENST00000415920 TMEM191CA6NGB0 347 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 OTOL1A6NHN0 477 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-209ENST00000415920 PJA2O43164 708 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 PFKLP17858 780 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 RDXP35241 583 aaKnown RBP14.14□□□□□ -0.15
CPNE1-209ENST00000415920 PTPN9P43378 593 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 ZNF143P52747 638 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-209ENST00000415920 DEUP1Q05D60 604 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 MESDQ14696 234 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 CSRP2Q16527 193 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 SLC25A52Q3SY17 297 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 CCDC14Q49A88 953 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 NAIF1Q69YI7 327 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-209ENST00000415920 KLHDC10Q6PID8 442 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 ARCQ7LC44 396 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 RALGPS2Q86X27 583 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-209ENST00000415920 NETO1Q8TDF5 533 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 RNF34Q969K3 372 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 NPY6RQ99463 290 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 CNPY3Q9BT09 278 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 C8orf33Q9H7E9 229 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-209ENST00000415920 TRMT1Q9NXH9 659 aaKnown RBP14.14□□□□□ -0.15
CPNE1-209ENST00000415920 IP6K2Q9UHH9 426 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 GUCA1BQ9UMX6 200 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 CCL26Q9Y258 94 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 DUSP10Q9Y6W6 482 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 CHD8Q9HCK8 2581 aa14.14□□□□□ -0.15
CPNE1-209ENST00000415920 MYO1FO00160 1098 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 SCAMP3O14828 347 aaKnown RBP14.13□□□□□ -0.15
CPNE1-209ENST00000415920 ZSCAN12O43309 604 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 MTA2O94776 668 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 MOCS3O95396 460 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 MOCS2O96007 188 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-209ENST00000415920 APOEP02649 317 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 GBP1P32455 592 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 GJC1P36383 396 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 SSR1P43307 286 aaKnown RBP14.13□□□□□ -0.15
CPNE1-209ENST00000415920 TBX4P57082 545 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 SLC7A9P82251 487 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 USP4Q13107 963 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 SF3A2Q15428 464 aaKnown RBP14.13□□□□□ -0.15
CPNE1-209ENST00000415920 RAB6CQ53S08 254 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 DGKKQ5KSL6 1271 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 SH3PXD2AQ5TCZ1 1133 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 DAB2IPQ5VWQ8 1189 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 TRIM68Q6AZZ1 485 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 SND1Q7KZF4 910 aaKnown RBP eCLIP14.13□□□□□ -0.15
CPNE1-209ENST00000415920 BPIFB1Q8TDL5 484 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 FNIP1Q8TF40 1166 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 MSANTD3Q96H12 275 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 ADAM33Q9BZ11 813 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 RAB6CQ9H0N0 254 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 GOLPH3Q9H4A6 298 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 HPS4Q9NQG7 708 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 PIGVQ9NUD9 493 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 CALCOCO1Q9P1Z2 691 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 CFAP97Q9P2B7 532 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 SALL4Q9UJQ4 1053 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 ARHGAP26Q9UNA1 814 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 TLR6Q9Y2C9 796 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 SH3BP1Q9Y3L3 701 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 PAXBP1Q9Y5B6 917 aa14.13□□□□□ -0.15
CPNE1-209ENST00000415920 USP27XA6NNY8 438 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 BTNL10A8MVZ5 291 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 BUB1BO60566 1050 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-209ENST00000415920 LRP3O75074 770 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 RNF8O76064 485 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 IGLV3-25P01717 112 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 ARHGAP25P42331 645 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 TRIP4Q15650 581 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-209ENST00000415920 IFI16Q16666 785 aaKnown RBP14.12□□□□□ -0.15
CPNE1-209ENST00000415920 FSTL4Q6MZW2 842 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 SCYL2Q6P3W7 929 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 STRADAQ7RTN6 431 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 FAM131BQ86XD5 332 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 DDX42Q86XP3 938 aaKnown RBP eCLIP14.12□□□□□ -0.15
CPNE1-209ENST00000415920 ZNF276Q8N554 614 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 SH3RF2Q8TEC5 729 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 USP13Q92995 863 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-209ENST00000415920 PLD4Q96BZ4 506 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 ZFRQ96KR1 1074 aaKnown RBP14.12□□□□□ -0.15
CPNE1-209ENST00000415920 FCRL2Q96LA5 508 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-209ENST00000415920 SMOC1Q9H4F8 434 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 KIF9Q9HAQ2 790 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 FBRSL1Q9HCM7 1045 aaKnown RBP14.12□□□□□ -0.15
CPNE1-209ENST00000415920 TDP1Q9NUW8 608 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 OBP2AQ9NY56 170 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 LCMT1Q9UIC8 334 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 LSM7Q9UK45 103 aaKnown RBP14.12□□□□□ -0.15
CPNE1-209ENST00000415920 HBS1LQ9Y450 684 aaKnown RBP14.12□□□□□ -0.15
CPNE1-209ENST00000415920 CAPN6Q9Y6Q1 641 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 SPAG17Q6Q759 2223 aa14.12□□□□□ -0.15
CPNE1-209ENST00000415920 SOBPA7XYQ1 873 aa14.11□□□□□ -0.15
CPNE1-209ENST00000415920 LEFTY2O00292 366 aa14.11□□□□□ -0.15
CPNE1-209ENST00000415920 AXIN1O15169 862 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms