RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NT5C3AQ9H0P0 336 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 OSGEPL1Q9H4B0 414 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 NCOA5Q9HCD5 579 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 CHKBQ9Y259 395 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ADGRA3Q8IWK6 1321 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 A0A1W2PQ72 361 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 FAM187AA6NFU0 413 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 C12orf71A8MTZ7 269 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 NUPL2O15504 423 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 DYNC1LI2O43237 492 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 PLEKP08567 350 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 TIMP2P16035 220 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 PLCG1P19174 1290 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 HTR7P34969 479 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 BMXP51813 675 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 NR1H2P55055 460 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 OCA2Q04671 838 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 LGALS3BPQ08380 585 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 DSC1Q08554 894 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ABRQ12979 859 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 FRG1Q14331 258 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 SNX17Q15036 470 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TRIP13Q15645 432 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 SLC45A4Q5BKX6 768 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 PPM1LQ5SGD2 360 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 PDSS1Q5T2R2 415 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ZNF425Q6IV72 752 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 PPP4R3CPQ6ZMV5 832 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 NLRX1Q86UT6 975 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 WDR49Q8IV35 697 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 CLYBLQ8N0X4 340 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 MARVELD2Q8N4S9 558 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 PPHLN1Q8NEY8 458 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 VANGL1Q8TAA9 524 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 C7orf43Q8WVR3 580 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SNX19Q92543 992 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TXNDC15Q96J42 360 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 BTBD9Q96Q07 612 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 CDADC1Q9BWV3 514 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 NCOR1P1Q9H4R4 102 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 MAGEE1Q9HCI5 957 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 NGRNQ9NPE2 291 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 ARHGAP20Q9P2F6 1191 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TFR2Q9UP52 801 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 MYH4Q9Y623 1939 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 H0Y626 953 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 J3QRK9 145 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 ZNF701M0R085 212 aaPredicted RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 MAGEC1O60732 1142 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 RBBP9O75884 186 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 POLR2BP30876 1174 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 OR1G1P47890 313 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 NPTX2P47972 431 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 RPP30P78346 268 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 PTPN11Q06124 597 aaPredicted RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 KLRC3Q07444 240 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 DBPQ10586 325 aaPredicted RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 GRSF1Q12849 480 aaKnown RBP eCLIP5.36□□□□□ -1.55
HERC4-205ENST00000412272 KRT81Q14533 505 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 NCF4Q15080 339 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 AACSQ86V21 672 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 STX12Q86Y82 276 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 PALM2Q8IXS6 379 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 SRRM1Q8IYB3 904 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 SYCE1Q8N0S2 351 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 CADM2Q8N3J6 435 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 ST8SIA2Q92186 375 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 FIG4Q92562 907 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 AKAP1Q92667 903 aaKnown RBP eCLIP5.36□□□□□ -1.55
HERC4-205ENST00000412272 TANKQ92844 425 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 TRIM63Q969Q1 353 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 FBXL8Q96CD0 374 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 VCPIP1Q96JH7 1222 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 MLXIPQ9HAP2 919 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 LGALS13Q9UHV8 139 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 PCDHGB4Q9UN71 923 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 CTNND2Q9UQB3 1225 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 INVSQ9Y283 1065 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 ANKRD6Q9Y2G4 727 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 PCDHGB5Q9Y5G0 923 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 ATRNO75882 1429 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 CLUHO75153 1309 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 FAM170AA1A519 330 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 MTMR11A4FU01 709 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 F8W036 122 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 PLK4O00444 970 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 TXNDC9O14530 226 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 CCNDBP1O95273 360 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 ASS1P00966 412 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 CAPNS1P04632 268 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 ITIH1P19827 911 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 GARTP22102 1010 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 ARNTP27540 789 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 ALDH3B2P48448 385 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 AP1S2P56377 157 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 CTBSQ01459 385 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 NTRK3Q16288 839 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 MAPKAPK3Q16644 382 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms