RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 SPASTQ9UBP0 616 aa12.48□□□□□ -0.41
PXMP4-203ENST00000409299 TMCO1Q9UM00 188 aa12.48□□□□□ -0.41
PXMP4-203ENST00000409299 FAM86B1E9PN63 330 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 TRIM13O60858 407 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 EIF2S1P05198 315 aaKnown RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 FAM86B2P0C5J1 330 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 PPM1LQ5SGD2 360 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 HERC6Q8IVU3 1022 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 DEFB107AQ8IZN7 70 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 BDH2Q9BUT1 245 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 PDGFDQ9GZP0 370 aaPredicted RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 CROTQ9UKG9 612 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 CNTNAP2Q9UHC6 1331 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 XYLBO75191 536 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 DDHD2O94830 711 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 ACADMP11310 421 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 EIF4BP23588 611 aaKnown RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 CEP78Q5JTW2 689 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 GDPD5Q8WTR4 605 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 DEFB118Q96PH6 123 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 SH3GL2Q99962 352 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 BBS2Q9BXC9 721 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 ASB7Q9H672 318 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 CNOT3O75175 753 aaKnown RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 NUMBP49757 651 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 TBCELQ5QJ74 424 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 RNF43Q68DV7 783 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 OTOAQ7RTW8 1153 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 ILDR1Q86SU0 546 aaPredicted RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 TCP10LQ8TDR4 215 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 GLMNQ92990 594 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 ATXN3LQ9H3M9 355 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 SIK3Q9Y2K2 1263 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 CAMTA1Q9Y6Y1 1673 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 ARHGEF28Q8N1W1 1705 aaKnown RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 ZNF541Q9H0D2 1346 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 E9PBE3 544 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 DDX3XO00571 662 aaKnown RBP eCLIP12.47□□□□□ -0.413e-9■■■■■ 46.7
PXMP4-203ENST00000409299 HMGB3O15347 200 aaKnown RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 KLHL41O60662 606 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 RARAP10276 462 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 CHI3L1P36222 383 aaPredicted RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 ELK3P41970 407 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 SKIV2L2P42285 1042 aaKnown RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 HK2P52789 917 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 RHBDL3P58872 404 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 LRRC74BQ6ZQY2 392 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 ARHGEF19Q8IW93 802 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 SETD9Q8NE22 299 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 ZFP42Q96MM3 310 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 PGLYRP2Q96PD5 576 aa12.47□□□□□ -0.41
PXMP4-203ENST00000409299 RPL26L1Q9UNX3 145 aaKnown RBP12.47□□□□□ -0.41
PXMP4-203ENST00000409299 TRIM24O15164 1050 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 ENDOD1O94919 500 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 SLC12A3P55017 1021 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 ST3GAL1Q11201 340 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 XRCC4Q13426 336 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 GALNTL6Q49A17 601 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 SLC45A4Q5BKX6 768 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 CELF3Q5SZQ8 465 aaKnown RBP12.46□□□□□ -0.41
PXMP4-203ENST00000409299 ZNF75CPQ92670 426 aaPredicted RBP12.46□□□□□ -0.41
PXMP4-203ENST00000409299 SYT15Q9BQS2 421 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 TMEM79Q9BSE2 394 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 DYRK1BQ9Y463 629 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 UBA1P22314 1058 aaKnown RBP12.46□□□□□ -0.41
PXMP4-203ENST00000409299 NCF4Q15080 339 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 LRRC38Q5VT99 294 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 DHFR2Q86XF0 187 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 SHCBP1LQ9BZQ2 653 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 MYLK2Q9H1R3 596 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 TLR8Q9NR97 1041 aaKnown RBP12.46□□□□□ -0.41
PXMP4-203ENST00000409299 GPATCH2LQ9NWQ4 482 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 CYP39A1Q9NYL5 469 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 PCYOX1Q9UHG3 505 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 VPS28Q9UK41 221 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 PLA2G4CQ9UP65 541 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 SPACA6W5XKT8 324 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 APOC4-APOC2K7ER74 178 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 CHADO15335 359 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 TBC1D12O60347 775 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 APOC2P02655 101 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 PSMC6P62333 389 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 VGLL2Q8N8G2 317 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 HTR3CQ8WXA8 447 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 RMND5BQ96G75 393 aaPredicted RBP12.46□□□□□ -0.41
PXMP4-203ENST00000409299 V9GYQ6 96 aa12.46□□□□□ -0.41
PXMP4-203ENST00000409299 ATXN2Q99700 1313 aaKnown RBP12.46□□□□□ -0.41
PXMP4-203ENST00000409299 TMEM114B3SHH9 223 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 ZCCHC18P0CG32 403 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 FLT3LGP49771 235 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 SNX30Q5VWJ9 437 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 FAM45BPQ6NSW5 357 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 MAP4K3Q8IVH8 894 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 STARD8Q92502 1023 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 CATSPER2Q96P56 530 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 TMEM150BA6NC51 233 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 PLA2G6O60733 806 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 CYP1A2P05177 515 aa12.46□□□□□ -0.42
PXMP4-203ENST00000409299 CCT8P50990 548 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms