RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RNASEH2AO75792 299 aaKnown RBP17.38■□□□□ 0.37
CHMP3-203ENST00000409225 CKMT2P17540 419 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 POLR2EP19388 210 aaKnown RBP17.38■□□□□ 0.37
CHMP3-203ENST00000409225 PDCP20941 246 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 CD70P32970 193 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 SGSHP51688 502 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 STK38Q15208 465 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 ZNF394Q53GI3 561 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 KDM7AQ6ZMT4 941 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 IQUBQ8NA54 791 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 WFDC5Q8TCV5 224 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 NDRG1Q92597 394 aaKnown RBP17.38■□□□□ 0.37
CHMP3-203ENST00000409225 NEUROG2Q9H2A3 272 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 CYP3A43Q9HB55 503 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 SCML1Q9UN30 329 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 MYO18BQ8IUG5 2567 aa17.38■□□□□ 0.37
CHMP3-203ENST00000409225 RNASEH1O60930 286 aaKnown RBP17.37■□□□□ 0.37
CHMP3-203ENST00000409225 SIN3BO75182 1162 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 INSM1Q01101 510 aaPredicted RBP17.37■□□□□ 0.37
CHMP3-203ENST00000409225 RHDQ02161 417 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 ILKQ13418 452 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 KCNJ12Q14500 433 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 ARHGAP40Q5TG30 622 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 DHX40Q8IX18 779 aaKnown RBP17.37■□□□□ 0.37
CHMP3-203ENST00000409225 DCBLD1Q8N8Z6 715 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 OR2T34Q8NGX1 318 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 SERAC1Q96JX3 654 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 HEXIM2Q96MH2 286 aaKnown RBP17.37■□□□□ 0.37
CHMP3-203ENST00000409225 OMDQ99983 421 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 BACH2Q9BYV9 841 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 IMPG2Q9BZV3 1241 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 SEMA4CQ9C0C4 833 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 DNAI2Q9GZS0 605 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 NIF3L1Q9GZT8 377 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 CLMPQ9H6B4 373 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 CPNE5Q9HCH3 593 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 DMAC2Q9NW81 257 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 SFMBT1Q9UHJ3 866 aa17.37■□□□□ 0.37
CHMP3-203ENST00000409225 ATMQ13315 3056 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 TLR4O00206 839 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 TKTL1P51854 596 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 TMPRSS3P57727 454 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 NXPH1P58417 271 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 ZNF445P59923 1031 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 ST8SIA6P61647 398 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 SFSWAPQ12872 951 aaKnown RBP17.36■□□□□ 0.37
CHMP3-203ENST00000409225 CST6Q15828 149 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 SLC45A4Q5BKX6 768 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 RAB41Q5JT25 222 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 C1orf220Q5T0J3 134 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 SFMBT2Q5VUG0 894 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 BROXQ5VW32 411 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 PIGZQ86VD9 579 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 MMAAQ8IVH4 418 aaKnown RBP17.36■□□□□ 0.37
CHMP3-203ENST00000409225 FAM181AQ8N9Y4 354 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 ZNF248Q8NDW4 579 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 TMC2Q8TDI7 906 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 RFFLQ8WZ73 363 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 OLA1Q9NTK5 396 aaKnown RBP17.36■□□□□ 0.37
CHMP3-203ENST00000409225 ADAMTS1Q9UHI8 967 aa17.36■□□□□ 0.37
CHMP3-203ENST00000409225 ARHGAP6O43182 974 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 TBL1XO60907 577 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 ZBED1O96006 694 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 MT-CO3P00414 261 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 SYT1P21579 422 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 NASPP49321 788 aaPredicted RBP17.35■□□□□ 0.37
CHMP3-203ENST00000409225 CCR5P51681 352 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 PCBP4P57723 403 aaKnown RBP17.35■□□□□ 0.37
CHMP3-203ENST00000409225 CUL4BQ13620 913 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 LY6DQ14210 128 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 ADGRF1Q5T601 910 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 CEP135Q66GS9 1140 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 RFWD3Q6PCD5 774 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 KANSL1Q7Z3B3 1105 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 CACTIN-AS1Q8N1I8 211 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 LINC00301Q8NCQ3 95 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 TAS1R2Q8TE23 839 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 RNF139Q8WU17 664 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 EDEM1Q92611 657 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 WBP1Q96G27 269 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 MYO19Q96H55 970 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 ULBP1Q9BZM6 244 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 STOML2Q9UJZ1 356 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 HBS1LQ9Y450 684 aaKnown RBP17.35■□□□□ 0.37
CHMP3-203ENST00000409225 PCDHB1Q9Y5F3 818 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 COL6A6A6NMZ7 2263 aa17.35■□□□□ 0.37
CHMP3-203ENST00000409225 IKBKBO14920 756 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 SPTLC2O15270 562 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 MSI1O43347 362 aaKnown RBP17.34■□□□□ 0.37
CHMP3-203ENST00000409225 SDC3O75056 442 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 NR3C1P04150 777 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 SLFN14P0C7P3 912 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 AFMP43652 599 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 RXRGP48443 463 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 GCLMP48507 274 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 PSMD8P48556 350 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 HNRNPA1L2Q32P51 320 aaKnown RBP17.34■□□□□ 0.37
CHMP3-203ENST00000409225 SPATS2Q86XZ4 545 aaKnown RBP17.34■□□□□ 0.37
CHMP3-203ENST00000409225 SLC9A9Q8IVB4 645 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 OXR1Q8N573 874 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms