RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 FAM72DQ6L9T8 149 aa17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 TMEM110Q86TL2 294 aa17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 PIGZQ86VD9 579 aa17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 FAM72BQ86X60 149 aa17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 PLD6Q8N2A8 252 aaKnown RBP17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 SPATA6LQ8N4H0 392 aa17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 MTBPQ96DY7 904 aa17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 VCXQ9H320 206 aa17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 TLE6Q9H808 572 aa17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 SCOCQ9UIL1 159 aa17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 PCDHA11Q9Y5I1 949 aa17.52■□□□□ 0.39
SNRNP70-202ENST00000401730 KLHL33A6NCF5 533 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 AMHP03971 560 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 TEX44Q53QW1 395 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 DPY19L2Q6NUT2 758 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 ERO1BQ86YB8 467 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 PPFIBP2Q8ND30 876 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 SLC26A7Q8TE54 656 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 ZNF670Q9BS34 389 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 MED10Q9BTT4 135 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 KCNK4Q9NYG8 393 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 KLHL8Q9P2G9 620 aaPredicted RBP17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 EMCNQ9ULC0 261 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 CIB2O75838 187 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 SLC25A27O95847 323 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 PROCP04070 461 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 HOXA11P31270 313 aaPredicted RBP17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 GLRBP48167 497 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 IRF9Q00978 393 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 FAM219BQ5XKK7 198 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 PACS1Q6VY07 963 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 EXOC8Q8IYI6 725 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 ACVR1CQ8NER5 493 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 ZNF669Q96BR6 464 aaPredicted RBP17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 SIRPGQ9P1W8 387 aa17.51■□□□□ 0.39
SNRNP70-202ENST00000401730 FAM159BA6NKW6 160 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 DYNC1LI2O43237 492 aaPredicted RBP17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 DNAJC6O75061 913 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 DGKIO75912 1065 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 AVPR1AP37288 418 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 ZNF484Q5JVG2 852 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 IZUMO2Q6UXV1 221 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 DPP9Q86TI2 863 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 SH3TC2Q8TF17 1288 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 EDEM1Q92611 657 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 C16orf70Q9BSU1 422 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.5■□□□□ 0.394e-8■□□□□ 9.6
SNRNP70-202ENST00000401730 TAGLN3Q9UI15 199 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 SMAPO00193 183 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 LIN7AO14910 233 aaPredicted RBP17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 TGDSO95455 350 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 RPS6KA3P51812 740 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 SOX4Q06945 474 aaPredicted RBP17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 HSP90AA5PQ58FG0 334 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 MARCH8Q5T0T0 291 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 IL31Q6EBC2 164 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 TAPT1Q6NXT6 567 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 RNF148Q8N7C7 305 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 KCNN1Q92952 543 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 CELF6Q96J87 481 aaKnown RBP17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 ZFP42Q96MM3 310 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 KRT82Q9NSB4 513 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 DNAJC25-GNG10A0A024R161 153 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 SDR42E2A6NKP2 422 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 MAP3K7O43318 606 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 DCXO43602 365 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 MAP3K7CLP57077 242 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 LAMB3Q13751 1172 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 RASIP1Q5U651 963 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 TMPRSS6Q8IU80 811 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 WDR75Q8IWA0 830 aaKnown RBP17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 SLC7A14Q8TBB6 771 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 DNAJB3Q8WWF6 145 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 MFSD3Q96ES6 412 aa17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 FCRL3Q96P31 734 aaPredicted RBP17.5■□□□□ 0.39
SNRNP70-202ENST00000401730 TRDMT1O14717 391 aaKnown RBP17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 STK10O94804 968 aaKnown RBP17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 ITGA2BP08514 1039 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 LAMC2Q13753 1193 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 PAN2Q504Q3 1202 aaKnown RBP17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 PKDCCQ504Y2 493 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 CERCAMQ5T4B2 595 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 LPCAT4Q643R3 524 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 GPC2Q8N158 579 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 PHTF2Q8N3S3 785 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 RNF169Q8NCN4 708 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 CAPN14A8MX76 684 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 CRHR1P34998 444 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 SLC26A2P50443 739 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 TEDDM1Q5T9Z0 273 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 C9orf57Q5W0N0 161 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 ZNF567Q8N184 647 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 BEST2Q8NFU1 509 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 TMEM40Q8WWA1 233 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 MARK4Q96L34 752 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 GBP5Q96PP8 586 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 RHOBTB2Q9BYZ6 727 aa17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 APOBEC2Q9Y235 224 aaKnown RBP17.49■□□□□ 0.39
SNRNP70-202ENST00000401730 FIS1Q9Y3D6 152 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms