RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 CEP78Q5JTW2 689 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 N4BP2L1Q5TBK1 243 aaPredicted RBP14.08□□□□□ -0.16
RUNX3-203ENST00000399916 ZFP1Q6P2D0 407 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 ASZ1Q8WWH4 475 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 DHX38Q92620 1227 aaKnown RBP14.08□□□□□ -0.16
RUNX3-203ENST00000399916 RTFDC1Q9BY42 306 aaPredicted RBP14.08□□□□□ -0.16
RUNX3-203ENST00000399916 FOXP3Q9BZS1 431 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 ZC3H12CQ9C0D7 883 aaKnown RBP14.08□□□□□ -0.16
RUNX3-203ENST00000399916 PTPRHQ9HD43 1115 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 MRPL40Q9NQ50 206 aaKnown RBP14.08□□□□□ -0.16
RUNX3-203ENST00000399916 COG5Q9UP83 839 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 BTBD3Q9Y2F9 522 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 ECM29Q5VYK3 1845 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 INPP4BO15327 924 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 TBX1O43435 398 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 TBC1D4O60343 1298 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 DBTP11182 482 aaKnown RBP14.08□□□□□ -0.16
RUNX3-203ENST00000399916 CPA3P15088 417 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 SLC15A3Q8IY34 581 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 MTERF3Q96E29 417 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 TMEM109Q9BVC6 243 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.08□□□□□ -0.16
RUNX3-203ENST00000399916 THAP1Q9NVV9 213 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 TOR4AQ9NXH8 423 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 CCDC167Q9P0B6 97 aa14.08□□□□□ -0.16
RUNX3-203ENST00000399916 BTNL10A8MVZ5 291 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 PLSCR1O15162 318 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 GAP43P17677 238 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 HOXA7P31268 230 aaPredicted RBP14.07□□□□□ -0.16
RUNX3-203ENST00000399916 PTGIRP43119 386 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 NAMPTP43490 491 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 XIAPP98170 497 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 ZNF410Q86VK4 478 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 ZNF555Q8NEP9 628 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 PMEPA1Q969W9 287 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 TUFT1Q9NNX1 390 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 DNAJC28Q9NX36 388 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 ZNF221Q9UK13 617 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 POLR2EP19388 210 aaKnown RBP14.07□□□□□ -0.16
RUNX3-203ENST00000399916 ANXA13P27216 316 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 HOXD13P35453 343 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 C16orf62Q7Z3J2 963 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 SLC26A11Q86WA9 606 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 HACE1Q8IYU2 909 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 BBS5Q8N3I7 341 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 ATP6V1E2Q96A05 226 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 NXF1Q9UBU9 619 aaKnown RBP14.07□□□□□ -0.16
RUNX3-203ENST00000399916 GTF3C4Q9UKN8 822 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 VWA5AO00534 786 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 PPP1R11O60927 126 aaPredicted RBP14.07□□□□□ -0.16
RUNX3-203ENST00000399916 NAT2P11245 290 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 GARTP22102 1010 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 SNX16P57768 344 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 TNFAIP2Q03169 654 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 AGKQ53H12 422 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 CGB2Q6NT52 195 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 KCTD4Q8WVF5 259 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 MCEEQ96PE7 176 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 RAB26Q9ULW5 256 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 PKD1L3Q7Z443 1732 aa14.07□□□□□ -0.16
RUNX3-203ENST00000399916 CSDE1O75534 798 aaKnown RBP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 SRP72O76094 671 aaKnown RBP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 CDH2P19022 906 aaPredicted RBP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 PSMA4P25789 261 aaKnown RBP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 ABCG1P45844 678 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 CDK9P50750 372 aaKnown RBP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 PEX3P56589 373 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 SF3B4Q15427 424 aaKnown RBP eCLIP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 ZCCHC9Q8N567 271 aaKnown RBP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 SLC43A3Q8NBI5 491 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 LRTOMTQ8WZ04 291 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 PRICKLE1Q96MT3 831 aaPredicted RBP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 TASP1Q9H6P5 420 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 CDYLQ9Y232 598 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 PCDHA3Q9Y5H8 950 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 ASTN1O14525 1302 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 E7ENX8 843 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 NBNO60934 754 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 SERPINA6P08185 405 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 HSMCR30P0CW71 290 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 CCND2P30279 289 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 PPP4CP60510 307 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 ROR1Q01973 937 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 PTK6Q13882 451 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 CCNG2Q16589 344 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 XKR9Q5GH70 373 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 CRTC3Q6UUV7 619 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 SLC22A16Q86VW1 577 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 FBXL13Q8NEE6 735 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 LRRC20Q8TCA0 184 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 ATP6V1HQ9UI12 483 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 LOC100506127A0A0U1RQW1 187 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 TISP43B9A030 160 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 AURKAO14965 403 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 SLC16A3O15427 465 aaKnown RBP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 TFAP2AP05549 437 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 HSPA1AP0DMV8 641 aaKnown RBP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 HSPA1BP0DMV9 641 aaKnown RBP14.06□□□□□ -0.16
RUNX3-203ENST00000399916 ECT2LQ008S8 904 aa14.06□□□□□ -0.16
RUNX3-203ENST00000399916 DGUOKQ16854 277 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms