RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 XKR5Q6UX68 686 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 AHI1Q8N157 1196 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 MAML3Q96JK9 1138 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 TARS2Q9BW92 718 aaKnown RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 ADA2Q9NZK5 511 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 EBF1Q9UH73 591 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 NUB1Q9Y5A7 615 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 E7ESA3 106 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 GIPC1O14908 333 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 ZBTB14O43829 449 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 OCM2P0CE71 109 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 OCMP0CE72 109 aaPredicted RBP17.52■□□□□ 0.4
PTPRA-205ENST00000399903 CD97P48960 835 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 LILRA2Q8N149 483 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 MPP5Q8N3R9 675 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 GPRASP2Q96D09 838 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 HAUS8Q9BT25 410 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 TRNAU1APQ9NX07 287 aaKnown RBP17.52■□□□□ 0.4
PTPRA-205ENST00000399903 EDN1P05305 212 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 KRT3P12035 628 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 MMP8P22894 467 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 KDELR1P24390 212 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 ABCG1P45844 678 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 CDH6P55285 790 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 ADGRE1Q14246 886 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 MFSD4BQ5TF39 518 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 MAVSQ7Z434 540 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 ZBTB33Q86T24 672 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 PLGRKTQ9HBL7 147 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 C6orf203Q9P0P8 240 aaPredicted RBP17.52■□□□□ 0.4
PTPRA-205ENST00000399903 EPS15L1Q9UBC2 864 aa17.52■□□□□ 0.4
PTPRA-205ENST00000399903 CSDE1O75534 798 aaKnown RBP17.52■□□□□ 0.39
PTPRA-205ENST00000399903 LYPLA2O95372 231 aa17.52■□□□□ 0.39
PTPRA-205ENST00000399903 MAPTP10636 758 aaKnown RBP17.52■□□□□ 0.39
PTPRA-205ENST00000399903 PDAP1Q13442 181 aaKnown RBP17.52■□□□□ 0.39
PTPRA-205ENST00000399903 EMC2Q15006 297 aa17.52■□□□□ 0.39
PTPRA-205ENST00000399903 TRIM72Q6ZMU5 477 aa17.52■□□□□ 0.39
PTPRA-205ENST00000399903 PHF13Q86YI8 300 aaPredicted RBP17.52■□□□□ 0.39
PTPRA-205ENST00000399903 MAP4K3Q8IVH8 894 aa17.52■□□□□ 0.39
PTPRA-205ENST00000399903 C12orf56Q8IXR9 622 aa17.52■□□□□ 0.39
PTPRA-205ENST00000399903 KCTD17Q8N5Z5 321 aa17.52■□□□□ 0.39
PTPRA-205ENST00000399903 ANKEF1Q9NU02 776 aa17.52■□□□□ 0.39
PTPRA-205ENST00000399903 TBC1D23Q9NUY8 699 aa17.52■□□□□ 0.39
PTPRA-205ENST00000399903 RAB26Q9ULW5 256 aa17.52■□□□□ 0.39
PTPRA-205ENST00000399903 PTPRJQ12913 1337 aa17.52■□□□□ 0.39
PTPRA-205ENST00000399903 COL11A1P12107 1806 aaPredicted RBP17.52■□□□□ 0.39
PTPRA-205ENST00000399903 KIAA1217Q5T5P2 1943 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 EPHA3P29320 983 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 OSTNP61366 133 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 PIGHQ14442 188 aaPredicted RBP17.51■□□□□ 0.39
PTPRA-205ENST00000399903 OLFML1Q6UWY5 402 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 ABHD15Q6UXT9 468 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 PACS1Q6VY07 963 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 LRRC71Q8N4P6 559 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 TRAPPC12Q8WVT3 735 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 IMPG2Q9BZV3 1241 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 HOXC10Q9NYD6 342 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 NR2E3Q9Y5X4 410 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 ZNFX1Q9P2E3 1918 aaKnown RBP17.51■□□□□ 0.39
PTPRA-205ENST00000399903 J3QRK9 145 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 SNNO75324 88 aaPredicted RBP17.51■□□□□ 0.39
PTPRA-205ENST00000399903 CALB1P05937 261 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 SAT1P21673 171 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 HALP42357 657 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 KLF10Q13118 480 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 ART3Q13508 389 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 STXBP2Q15833 593 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 SLC9B1Q4ZJI4 515 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 FBXL8Q96CD0 374 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 SERPINI1Q99574 410 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 ZNF302Q9NR11 478 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 C20orf96Q9NUD7 363 aaPredicted RBP17.51■□□□□ 0.39
PTPRA-205ENST00000399903 GPATCH2LQ9NWQ4 482 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 SNX13Q9Y5W8 968 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 SSC5DA1L4H1 1573 aa17.51■□□□□ 0.39
PTPRA-205ENST00000399903 GRAP2O75791 330 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 GRIA1P42261 906 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 OXCT1P55809 520 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 PSMC1P62191 440 aaKnown RBP17.5■□□□□ 0.39
PTPRA-205ENST00000399903 TUBB3Q13509 450 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 GJC2Q5T442 439 aaPredicted RBP17.5■□□□□ 0.39
PTPRA-205ENST00000399903 PPP1R2P3Q6NXS1 205 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 UNC5AQ6ZN44 842 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 ERI1Q8IV48 349 aaKnown RBP17.5■□□□□ 0.39
PTPRA-205ENST00000399903 TMEM35BQ8NCS4 154 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 TMC2Q8TDI7 906 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 PPP1R13LQ8WUF5 828 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 COPS5Q92905 334 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 ATP2A3Q93084 1043 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 RCN3Q96D15 328 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 HAPLN2Q9GZV7 340 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 RNF181Q9P0P0 153 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 C19orf81C9J6K1 198 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 TPP1O14773 563 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 LRCH4O75427 683 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 ZBED1O96006 694 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 EIF2B2P49770 351 aaKnown RBP17.5■□□□□ 0.39
PTPRA-205ENST00000399903 NDST2P52849 883 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 MS4A2Q01362 244 aa17.5■□□□□ 0.39
PTPRA-205ENST00000399903 TMEM53Q6P2H8 277 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms