RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 TMEM86AQ8N2M4 240 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PJA1Q8NG27 643 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SMG7Q92540 1137 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 EHD3Q9NZN3 535 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SPTBN2O15020 2390 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 TRIM24O15164 1050 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 IDH3BO43837 385 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 KCNK10P57789 538 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ZNF438Q7Z4V0 828 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 UNC5BQ8IZJ1 945 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 Q8N9G6 341 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 CCDC120Q96HB5 630 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 CHCHD6Q9BRQ6 235 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 CLK4Q9HAZ1 481 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 ATP13A1Q9HD20 1204 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 C3orf70A6NLC5 250 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 MTHFRP42898 656 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 KCNC3Q14003 757 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 DNAJB3Q8WWF6 145 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 BTBD9Q96Q07 612 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 DEPDC7Q96QD5 511 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SPATA9Q9BWV2 254 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 POLR3BQ9NW08 1133 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 SNTG2Q9NY99 539 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 MYO18AQ92614 2054 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 LOC102724428A0A0B4J2F2 783 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 LRRC72A6NJI9 287 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 F6X3S4 739 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 AP3D1O14617 1153 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SIK1P57059 783 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PSMC6P62333 389 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SEC23AQ15436 765 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ZBED5Q49AG3 693 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PLPPR4Q7Z2D5 763 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 C11orf96Q7Z7L8 435 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 MLXIPQ9HAP2 919 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 FKBP14Q9NWM8 211 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 A8MV72 311 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 KLRF2D3W0D1 207 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 STK25O00506 426 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 STAG3L1P0CL83 205 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 CFL1P23528 166 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 EFHC1Q5JVL4 640 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PLEKHM3Q6ZWE6 761 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 GALNT15Q8N3T1 639 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 C7orf31Q8N865 590 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 GANCQ8TET4 914 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 MLXQ9UH92 298 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PCDHGB7Q9Y5F8 929 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SCAF4O95104 1147 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 DDX6P26196 483 aaKnown RBP eCLIP2.6□□□□□ -1.99
NEB-203ENST00000397345 MSX2P35548 267 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 SLC9A3P48764 834 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 KDSRQ06136 332 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 HYIQ5T013 277 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 LRRC8DQ7L1W4 858 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 FIG4Q92562 907 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 TCF12Q99081 682 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 TEX13BQ9BXU2 312 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 IRF2BPLQ9H1B7 796 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 TMEM8AQ9HCN3 771 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SHOC2Q9UQ13 582 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ANKRD12Q6UB98 2062 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 YTHDC2Q9H6S0 1430 aaKnown RBP2.59□□□□□ -1.99
NEB-203ENST00000397345 RGSL1A5PLK6 1076 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 AXIN1O15169 862 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 RPS6KA4O75676 772 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 S100A9P06702 114 aaKnown RBP2.59□□□□□ -1.99
NEB-203ENST00000397345 SRGNP10124 158 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 ETFRF1Q6IPR1 90 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 R3HCC1LQ7Z5L2 792 aaKnown RBP2.59□□□□□ -1.99
NEB-203ENST00000397345 STX12Q86Y82 276 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 C9orf43Q8TAL5 461 aaPredicted RBP2.59□□□□□ -1.99
NEB-203ENST00000397345 SOCS4Q8WXH5 440 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 LENG9Q96B70 501 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 XAGE2Q96GT9 111 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 ROGDIQ9GZN7 287 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 PTTG3PQ9NZH4 202 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 PCDHB6Q9Y5E3 794 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 DUSP10Q9Y6W6 482 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 DUOX2Q9NRD8 1548 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 ZSCAN9O15535 394 aaPredicted RBP2.59□□□□□ -1.99
NEB-203ENST00000397345 TNFAIP8O95379 198 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 MSH3P20585 1137 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 HARS2P49590 506 aaKnown RBP2.59□□□□□ -1.99
NEB-203ENST00000397345 CACNB3P54284 484 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 C1QBPQ07021 282 aaKnown RBP2.59□□□□□ -1.99
NEB-203ENST00000397345 MADCAM1Q13477 382 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 GADL1Q6ZQY3 521 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 SP8Q8IXZ3 490 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 TPCN2Q8NHX9 752 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 C12orf66Q96MD2 445 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 GGA3Q9NZ52 723 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 SNX9Q9Y5X1 595 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 CTTNBP2Q8WZ74 1663 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 E7EWF7 191 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 H7C4K7 107 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 SH2B2O14492 632 aaPredicted RBP2.59□□□□□ -1.99
NEB-203ENST00000397345 PLSCR1O15162 318 aa2.59□□□□□ -1.99
NEB-203ENST00000397345 PGM3O95394 542 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms