RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 C1orf220Q5T0J3 134 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 ERICH6BQ5W0A0 696 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 NCEH1Q6PIU2 408 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 PIGZQ86VD9 579 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 FMNL3Q8IVF7 1028 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 SPACA3Q8IXA5 215 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 GANCQ8TET4 914 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 RFFLQ8WZ73 363 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 TMA16Q96EY4 203 aaKnown RBP15.6■□□□□ 0.09
SEC13-206ENST00000397102 NIF3L1Q9GZT8 377 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 FBXL12Q9NXK8 326 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 HBS1LQ9Y450 684 aaKnown RBP15.6■□□□□ 0.09
SEC13-206ENST00000397102 CFAP46Q8IYW2 2715 aa15.6■□□□□ 0.09
SEC13-206ENST00000397102 COL6A6A6NMZ7 2263 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 LRRC72A6NJI9 287 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 C10orf142B7Z368 130 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 SPTLC2O15270 562 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 SLFN14P0C7P3 912 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 POLR2EP19388 210 aaKnown RBP15.59■□□□□ 0.09
SEC13-206ENST00000397102 GLDCP23378 1020 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 CCDC173Q0VFZ6 552 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 ADGRF1Q5T601 910 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 SFMBT2Q5VUG0 894 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 ERICH1Q86X53 443 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 OXR1Q8N573 874 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 OR2T34Q8NGX1 318 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 WBP1Q96G27 269 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 MYO19Q96H55 970 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 ZSCAN16Q9H4T2 348 aaPredicted RBP15.59■□□□□ 0.09
SEC13-206ENST00000397102 SERGEFQ9UGK8 458 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 ADAMTS1Q9UHI8 967 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 CLCA2Q9UQC9 943 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 MAST4O15021 2626 aa15.59■□□□□ 0.09
SEC13-206ENST00000397102 ARID1BQ8NFD5 2236 aaPredicted RBP15.59■□□□□ 0.09
SEC13-206ENST00000397102 TENM4Q6N022 2769 aa15.58■□□□□ 0.09
SEC13-206ENST00000397102 A0A1W2PP55 124 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 CYSRT1A8MQ03 144 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 RNASEH1O60930 286 aaKnown RBP15.58■□□□□ 0.08
SEC13-206ENST00000397102 CKMT2P17540 419 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 RXRGP48443 463 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 CCR5P51681 352 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 TKTL1P51854 596 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 NXPH1P58417 271 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 CUL4BQ13620 913 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 ZNF394Q53GI3 561 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 TAF1BQ53T94 588 aaPredicted RBP15.58■□□□□ 0.08
SEC13-206ENST00000397102 SLC45A4Q5BKX6 768 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 PM20D1Q6GTS8 502 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 SHC4Q6S5L8 630 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 ZNF557Q8N988 423 aaPredicted RBP15.58■□□□□ 0.08
SEC13-206ENST00000397102 WFDC5Q8TCV5 224 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 HEXIM2Q96MH2 286 aaKnown RBP15.58■□□□□ 0.08
SEC13-206ENST00000397102 IRX2Q9BZI1 471 aaPredicted RBP15.58■□□□□ 0.08
SEC13-206ENST00000397102 NEUROG2Q9H2A3 272 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 KCTD10Q9H3F6 313 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 MTG2Q9H4K7 406 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 ERVMER34-1Q9H9K5 563 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 FZD4Q9ULV1 537 aa15.58■□□□□ 0.08
SEC13-206ENST00000397102 TPX2Q9ULW0 747 aaKnown RBP15.58■□□□□ 0.08
SEC13-206ENST00000397102 PDXKO00764 312 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 WNT9AO14904 365 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 MID1O15344 667 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 CUTAO60888 179 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 SIN3BO75182 1162 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 ZBED1O96006 694 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 NR3C1P04150 777 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 CD70P32970 193 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 SGSHP51688 502 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 ST8SIA6P61647 398 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 INSM1Q01101 510 aaPredicted RBP15.57■□□□□ 0.08
SEC13-206ENST00000397102 RHDQ02161 417 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 KCNH2Q12809 1159 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 BNIP3Q12983 259 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 KCNJ12Q14500 433 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 CST6Q15828 149 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 HNRNPA1L2Q32P51 320 aaKnown RBP15.57■□□□□ 0.08
SEC13-206ENST00000397102 MPP7Q5T2T1 576 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 CEP135Q66GS9 1140 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 BHLHA9Q7RTU4 235 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 KANSL1Q7Z3B3 1105 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 DCBLD1Q8N8Z6 715 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 ZNF248Q8NDW4 579 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 TAS1R2Q8TE23 839 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 TTC17Q96AE7 1141 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 LGMNQ99538 433 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 OMDQ99983 421 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 ULBP1Q9BZM6 244 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 SFMBT1Q9UHJ3 866 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 MTMR6Q9Y217 621 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 FRMD4BQ9Y2L6 1034 aa15.57■□□□□ 0.08
SEC13-206ENST00000397102 TLR4O00206 839 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 MAPK13O15264 365 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 POLR2DO15514 142 aaKnown RBP15.56■□□□□ 0.08
SEC13-206ENST00000397102 RNASEH2AO75792 299 aaKnown RBP15.56■□□□□ 0.08
SEC13-206ENST00000397102 ASLP04424 464 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 ACP1P24666 158 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 AFMP43652 599 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 VAMP7P51809 220 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 SLC8A3P57103 927 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 STK4Q13043 487 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms