RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 ARRB1P49407 418 aaPredicted RBP20.55■□□□□ 0.88
UPK3B-203ENST00000394849 VAMP7P51809 220 aa20.55■□□□□ 0.88
UPK3B-203ENST00000394849 IL9RQ01113 521 aa20.55■□□□□ 0.88
UPK3B-203ENST00000394849 SEMG2Q02383 582 aa20.55■□□□□ 0.88
UPK3B-203ENST00000394849 MPP7Q5T2T1 576 aa20.55■□□□□ 0.88
UPK3B-203ENST00000394849 PM20D1Q6GTS8 502 aa20.55■□□□□ 0.88
UPK3B-203ENST00000394849 LAYNQ6UX15 382 aa20.55■□□□□ 0.88
UPK3B-203ENST00000394849 CACTIN-AS1Q8N1I8 211 aa20.55■□□□□ 0.88
UPK3B-203ENST00000394849 HEXIM2Q96MH2 286 aaKnown RBP20.55■□□□□ 0.88
UPK3B-203ENST00000394849 FCRL3Q96P31 734 aaPredicted RBP20.55■□□□□ 0.88
UPK3B-203ENST00000394849 RSPH9Q9H1X1 276 aaPredicted RBP20.55■□□□□ 0.88
UPK3B-203ENST00000394849 KCTD10Q9H3F6 313 aa20.55■□□□□ 0.88
UPK3B-203ENST00000394849 ABCB8Q9NUT2 735 aa20.55■□□□□ 0.88
UPK3B-203ENST00000394849 LRRC72A6NJI9 287 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 ZBED1O96006 694 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 CD58P19256 250 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 POLR2EP19388 210 aaKnown RBP20.54■□□□□ 0.88
UPK3B-203ENST00000394849 CASP1P29466 404 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 CUL4BQ13620 913 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 CEP135Q66GS9 1140 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 MBLAC2Q68D91 279 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 INTS8Q75QN2 995 aaKnown RBP20.54■□□□□ 0.88
UPK3B-203ENST00000394849 PIGZQ86VD9 579 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 GANCQ8TET4 914 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 SCAND2PQ9GZW5 306 aaPredicted RBP20.54■□□□□ 0.88
UPK3B-203ENST00000394849 PABPC3Q9H361 631 aaKnown RBP20.54■□□□□ 0.88
UPK3B-203ENST00000394849 GDF3Q9NR23 364 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 EXOC1Q9NV70 894 aa20.54■□□□□ 0.88
UPK3B-203ENST00000394849 CD38P28907 300 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 AFMP43652 599 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 STK4Q13043 487 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 TARDBPQ13148 414 aaKnown RBP eCLIP20.53■□□□□ 0.88
UPK3B-203ENST00000394849 SLC45A4Q5BKX6 768 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 RESP18Q5W5W9 173 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 GPR155Q7Z3F1 870 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 FMNL3Q8IVF7 1028 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 CEP57L1Q8IYX8 460 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 OXR1Q8N573 874 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 ZNF366Q8N895 744 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 ANKRD52Q8NB46 1076 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 SAP25Q8TEE9 199 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 RNF139Q8WU17 664 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 FGF11Q92914 225 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 APOBEC3GQ9HC16 384 aaKnown RBP20.53■□□□□ 0.88
UPK3B-203ENST00000394849 FBXL12Q9NXK8 326 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 ZNF462Q96JM2 2506 aa20.53■□□□□ 0.88
UPK3B-203ENST00000394849 PLXNA2O75051 1894 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 TLX3O43711 291 aaPredicted RBP20.52■□□□□ 0.88
UPK3B-203ENST00000394849 CALUO43852 315 aaPredicted RBP20.52■□□□□ 0.88
UPK3B-203ENST00000394849 PLA2G2AP14555 144 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 ACADVLP49748 655 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 TKTL1P51854 596 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 GALCP54803 685 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 ST8SIA6P61647 398 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 C1orf220Q5T0J3 134 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 HES3Q5TGS1 186 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 ARHGAP17Q68EM7 881 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 FBXL19Q6PCT2 694 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 GATAD2AQ86YP4 633 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 KDM1BQ8NB78 822 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 KIAA0895Q8NCT3 520 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 TAS1R2Q8TE23 839 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 TSC1Q92574 1164 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 ERVMER34-1Q9H9K5 563 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 FZD4Q9ULV1 537 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 MYLKQ15746 1914 aa20.52■□□□□ 0.88
UPK3B-203ENST00000394849 IRAK2O43187 625 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 ASLP04424 464 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 KRT13P13646 458 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 ACTN2P35609 894 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 CCR5P51681 352 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 ARID5BQ14865 1188 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 ZNF394Q53GI3 561 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 OR2T34Q8NGX1 318 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 TMEM176AQ96HP8 235 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 SLC6A18Q96N87 628 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 AASDHPPTQ9NRN7 309 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 ADAMTS1Q9UHI8 967 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 RAI2Q9Y5P3 530 aa20.51■□□□□ 0.87
UPK3B-203ENST00000394849 FAM47DPA6NHR8 397 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 KLRC4O43908 158 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 GTF2H1P32780 548 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 GCLMP48507 274 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 DNAJC3Q13217 504 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 NFIL3Q16649 462 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 HNRNPA1L2Q32P51 320 aaKnown RBP20.5■□□□□ 0.87
UPK3B-203ENST00000394849 NCEH1Q6PIU2 408 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 ZNF843Q8N446 348 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 EID2Q8N6I1 236 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 IPO9Q96P70 1041 aaKnown RBP20.5■□□□□ 0.87
UPK3B-203ENST00000394849 ABCC13Q9NSE7 274 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 TRAF3IP3Q9Y228 551 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 TENM4Q6N022 2769 aa20.5■□□□□ 0.87
UPK3B-203ENST00000394849 XPO1O14980 1071 aaKnown RBP20.49■□□□□ 0.87
UPK3B-203ENST00000394849 MYL1P05976 194 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 EPHA8P29322 1005 aaPredicted RBP20.49■□□□□ 0.87
UPK3B-203ENST00000394849 RXRGP48443 463 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 SLC11A2P49281 568 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 SHBQ15464 509 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 UNC45BQ8IWX7 931 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms