RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 SLC9A7Q96T83 725 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 SHOC2Q9UQ13 582 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 SCML2Q9UQR0 700 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 C5orf42Q9H799 3197 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 TANC1Q9C0D5 1861 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 UNC80Q8N2C7 3258 aa15.42■□□□□ 0.06
MKS1-202ENST00000393119 A6NNZ2 444 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 POC1B-GALNT4F8VUJ3 575 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 SCAMP3O14828 347 aaKnown RBP15.41■□□□□ 0.06
MKS1-202ENST00000393119 ALOX15BO15296 676 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 EFEMP2O95967 443 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 TIMP1P01033 207 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 HAPLN1P10915 354 aaPredicted RBP15.41■□□□□ 0.06
MKS1-202ENST00000393119 CRADDP78560 199 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 WASHC5Q12768 1159 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 PSMD5Q16401 504 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 ARL13BQ3SXY8 428 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 TUBB8Q3ZCM7 444 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 ANKRD20A2Q5SQ80 823 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 ANKRD20A1Q5TYW2 823 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 C1orf53Q5VUE5 145 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 ANKRD20A3Q5VUR7 823 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 CAND1Q86VP6 1230 aaKnown RBP15.41■□□□□ 0.06
MKS1-202ENST00000393119 ARMC5Q96C12 935 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 RTP4Q96DX8 246 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 TMEM175Q9BSA9 504 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 SMOC2Q9H3U7 446 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 XIRP2A4UGR9 3374 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 MICAL3Q7RTP6 2002 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 HMGB1P1B2RPK0 211 aaPredicted RBP15.41■□□□□ 0.06
MKS1-202ENST00000393119 RNF103O00237 685 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 RGS16O15492 202 aaPredicted RBP15.41■□□□□ 0.06
MKS1-202ENST00000393119 F9P00740 461 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 EN2P19622 333 aaPredicted RBP15.41■□□□□ 0.06
MKS1-202ENST00000393119 YWHAQP27348 245 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 ELK3P41970 407 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 GNGT1P63211 74 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 BTG3Q14201 252 aaPredicted RBP15.41■□□□□ 0.06
MKS1-202ENST00000393119 SPDYCQ5MJ68 293 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 PIK3R6Q5UE93 754 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 KIAA1841Q6NSI8 718 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 VSIG1Q86XK7 387 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 CDKL3Q8IVW4 592 aaPredicted RBP15.41■□□□□ 0.06
MKS1-202ENST00000393119 USP33Q8TEY7 942 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 TLCD1Q96CP7 247 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 ZNF689Q96CS4 500 aaPredicted RBP15.41■□□□□ 0.06
MKS1-202ENST00000393119 SERPINB12Q96P63 405 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 ARHGEF38Q9NXL2 777 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 HS3ST4Q9Y661 456 aa15.41■□□□□ 0.06
MKS1-202ENST00000393119 BPTFQ12830 3046 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 GOLGA6L7A0A1B0GV03 622 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 ZNF487B1APH4 448 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 ZFXP17010 805 aaPredicted RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 EIF3BP55884 814 aaKnown RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 C1QTNF8P60827 252 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 PAFAH1B3Q15102 231 aaKnown RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 USP41Q3LFD5 358 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 ANKS3Q6ZW76 656 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 CENPUQ71F23 418 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 ZNF534Q76KX8 674 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 SPRED2Q7Z698 418 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 YTHDF3Q7Z739 585 aaKnown RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 MON1AQ86VX9 555 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 CIR1Q86X95 450 aaPredicted RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 PSTKQ8IV42 348 aaKnown RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 ZNF567Q8N184 647 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 SCML4Q8N228 414 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 ZNF419Q96HQ0 510 aaPredicted RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 PAK5Q9P286 719 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 SZT2Q5T011 3432 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 NR2C2P49116 596 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 ZBTB17Q13105 803 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 PRKD1Q15139 912 aaPredicted RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 PDCD7Q8N8D1 485 aaKnown RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 COLGALT1Q8NBJ5 622 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 PYROXD1Q8WU10 500 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 AGAP3Q96P47 875 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 FAM129AQ9BZQ8 928 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 KLC2Q9H0B6 622 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 PLAC1Q9HBJ0 212 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 MLXIPLQ9NP71 852 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 DONSONQ9NYP3 566 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 CXXC1Q9P0U4 656 aaPredicted RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 VANGL2Q9ULK5 521 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 ZMYND8Q9ULU4 1186 aaPredicted RBP15.4■□□□□ 0.06
MKS1-202ENST00000393119 NUP205Q92621 2012 aa15.4■□□□□ 0.06
MKS1-202ENST00000393119 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 SLC38A8A6NNN8 435 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 ZBBXA8MT70 800 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 USP12O75317 370 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 CNTN5O94779 1100 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 PSMB4P28070 264 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 CCR1P32246 355 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 ARL4CP56559 192 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 C10orf120Q5SQS8 335 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 C3orf62Q6ZUJ4 267 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 TFAP2DQ7Z6R9 452 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 EXOC3L1Q86VI1 746 aa15.39■□□□□ 0.05
MKS1-202ENST00000393119 SPATS2Q86XZ4 545 aaKnown RBP15.39■□□□□ 0.05
MKS1-202ENST00000393119 GORASP1Q9BQQ3 440 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms