RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 FN1P02751 2386 aaKnown RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 TTC3P53804 2025 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 COL5A1P20908 1838 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 RYR1P21817 5038 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ATRNL1Q5VV63 1379 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 FRAS1Q86XX4 4008 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 TNKSO95271 1327 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 IGLV4-60A0A075B6I1 120 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 IGLV3-16A0A075B6K0 115 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 A0A087WUV0 522 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 A0A087X002 238 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ST20-MTHFSA0A0A6YYL1 179 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 MUC21A0A0G2JKD1 596 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 A0A0G2JLW4 131 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 A0A0J9YXV3 536 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 MUC21A0A140T8X8 626 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC12A8A0AV02 714 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC22A23A1A5C7 686 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 A1L4Q6 167 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PINLYPA6NC86 204 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF233A6NK53 670 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SMIM1B2RUZ4 78 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 HNRNPCL2B2RXH8 293 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM178BH3BS89 294 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 M0R2C6 588 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 KCNK3O14649 394 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 CAPN9O14815 690 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PPM1DO15297 605 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 TBX1O43435 398 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SNAI2O43623 268 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 GPRIN2O60269 458 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 MARCH6O60337 910 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PHF2O75151 1096 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM127O75204 238 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC43A1O75387 559 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 KRT37O76014 449 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 KBTBD11O94819 623 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 HAUS5O94927 633 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SLCO2B1O94956 709 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PCDH8O95206 1070 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 APOL3O95236 402 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ATG7O95352 703 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 TGDSO95455 350 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 AFPP02771 609 aaKnown RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 WNT1P04628 370 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PDHA1P08559 390 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 HOXB7P09629 217 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 RNASE2P10153 161 aaKnown RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 HAPLN1P10915 354 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 VDRP11473 427 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC5A1P13866 664 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ENO3P13929 434 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 FOLR2P14207 255 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PAX1P15863 534 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF823P16415 610 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 NAGAP17050 411 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PDCP20941 246 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 MDKP21741 143 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 MCM3P25205 808 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 OAS2P29728 719 aaKnown RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PPIFP30405 207 aaKnown RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 GNA15P30679 374 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 HOXA7P31268 230 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 HOXC8P31273 242 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC5A2P31639 672 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 GUCY1A2P33402 732 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 AVPR1AP37288 418 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 RFX5P48382 616 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 FMO5P49326 533 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 GPR15P49685 360 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF75DP51815 510 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 NUDT6P53370 316 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 COPB1P53618 953 aaKnown RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 GYS2P54840 703 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 WNT4P56705 351 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 LOXL3P58215 753 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SELENOVP59797 346 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PITX1P78337 314 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ADARB1P78563 741 aaKnown RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PLCB2Q00722 1185 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 BNC1Q01954 994 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 CSTF1Q05048 431 aaKnown RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ELAVL2Q12926 359 aaKnown RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 DLG1Q12959 904 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 TRAF1Q13077 416 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ZBTB17Q13105 803 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 TRAF3Q13114 568 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 MYBPHQ13203 477 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SRSF5Q13243 272 aaKnown RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC14A1Q13336 389 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 EIF4EBP1Q13541 118 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 GBX1Q14549 363 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 EPHA7Q15375 998 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 LY6EQ16553 131 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 C3AR1Q16581 482 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 CALCRLQ16602 461 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 ATP2B3Q16720 1220 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PFKFB3Q16875 520 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 PGS1Q32NB8 556 aa-0.26□□□□□ -2.45
TRAJ28-201ENST00000390509 TUBB8Q3ZCM7 444 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms