RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 COLEC12Q5KU26 742 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 TBC1D3GQ6DHY5 549 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 TBC1D3CQ6IPX1 549 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 USP30Q70CQ3 517 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 CCDC186Q7Z3E2 898 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 BRAPQ7Z569 592 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 UNC93AQ86WB7 457 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 SPATS2Q86XZ4 545 aaKnown RBP10.06□□□□□ -0.8
IFT88-203ENST00000389373 ZC3H3Q8IXZ2 948 aaKnown RBP10.06□□□□□ -0.8
IFT88-203ENST00000389373 TBC1D3Q8IZP1 549 aaPredicted RBP10.06□□□□□ -0.8
IFT88-203ENST00000389373 OXR1Q8N573 874 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 ZNF507Q8TCN5 953 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 PLEKHO2Q8TD55 490 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 RFFLQ8WZ73 363 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 HIC2Q96JB3 615 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 TWNKQ96RR1 684 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 DPH1Q9BZG8 443 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 RSPH9Q9H1X1 276 aaPredicted RBP10.06□□□□□ -0.8
IFT88-203ENST00000389373 CLIC5Q9NZA1 410 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 STIM2Q9P246 746 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 FBXO2Q9UK22 296 aaPredicted RBP10.06□□□□□ -0.8
IFT88-203ENST00000389373 SCML1Q9UN30 329 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 SMC3Q9UQE7 1217 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 SRPRBQ9Y5M8 271 aaKnown RBP10.06□□□□□ -0.8
IFT88-203ENST00000389373 KALRNO60229 2985 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 KNL1Q8NG31 2342 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 PTPRQQ9UMZ3 2332 aa10.06□□□□□ -0.8
IFT88-203ENST00000389373 MYH10P35580 1976 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 PLXNA2O75051 1894 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 A0A087X0B3 334 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 TRIM38O00635 465 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 EIF3DO15371 548 aaKnown RBP eCLIP10.05□□□□□ -0.8
IFT88-203ENST00000389373 FFAR2O15552 330 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 C4BPAP04003 597 aaKnown RBP10.05□□□□□ -0.8
IFT88-203ENST00000389373 MYF5P13349 255 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 CD58P19256 250 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 MAT2AP31153 395 aaKnown RBP10.05□□□□□ -0.8
IFT88-203ENST00000389373 CD70P32970 193 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 PSMD8P48556 350 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 CCR5P51681 352 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 ERVPABLB-1P60509 514 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 YWHAGP61981 247 aaKnown RBP eCLIP10.05□□□□□ -0.8
IFT88-203ENST00000389373 NFKB2Q00653 900 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 CST6Q15828 149 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 PROX2Q3B8N5 592 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 ZSCAN23Q3MJ62 389 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 PPP1R26Q5T8A7 1209 aaPredicted RBP10.05□□□□□ -0.8
IFT88-203ENST00000389373 SFMBT2Q5VUG0 894 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 FOXR1Q6PIV2 292 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 SND1Q7KZF4 910 aaKnown RBP eCLIP10.05□□□□□ -0.8
IFT88-203ENST00000389373 ZNF276Q8N554 614 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 NDRG1Q92597 394 aaKnown RBP10.05□□□□□ -0.8
IFT88-203ENST00000389373 PLD4Q96BZ4 506 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 DEPDC7Q96QD5 511 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 DUSP16Q9BY84 665 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 ABCG4Q9H172 646 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 POLR1BQ9H9Y6 1135 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 PNPLA8Q9NP80 782 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 THSD1Q9NS62 852 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 SFMBT1Q9UHJ3 866 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 USP3Q9Y6I4 520 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 CKAP5Q14008 2032 aa10.05□□□□□ -0.8
IFT88-203ENST00000389373 VPS37CA5D8V6 355 aaPredicted RBP10.04□□□□□ -0.8
IFT88-203ENST00000389373 OPA1O60313 960 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 TBL1XO60907 577 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 CSO75390 466 aaKnown RBP10.04□□□□□ -0.8
IFT88-203ENST00000389373 RBMS1P29558 406 aaKnown RBP10.04□□□□□ -0.8
IFT88-203ENST00000389373 PIK3CAP42336 1068 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 LSSP48449 732 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 SGSHP51688 502 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 AP3M2P53677 418 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 STAT4Q14765 748 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 POM121L1PQ3SYA9 428 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 ZNF394Q53GI3 561 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 SGO2Q562F6 1265 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 C3orf38Q5JPI3 329 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 FAM26FQ5R3K3 315 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.04□□□□□ -0.8
IFT88-203ENST00000389373 CCDC81Q6ZN84 652 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 KANSL1Q7Z3B3 1105 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 PRPF39Q86UA1 669 aaKnown RBP10.04□□□□□ -0.8
IFT88-203ENST00000389373 ARHGAP18Q8N392 663 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 MFSD2AQ8NA29 543 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 WFDC5Q8TCV5 224 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 PARD3BQ8TEW8 1205 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 TMX3Q96JJ7 454 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 NT5C1AQ9BXI3 368 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 LRRC27Q9C0I9 530 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 ERVMER34-1Q9H9K5 563 aa10.04□□□□□ -0.8
IFT88-203ENST00000389373 GOLGA6L7A0A1B0GV03 622 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 TTC34A8MYJ7 566 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 K7ENP7 123 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 MAST4O15021 2626 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 MAGEC1O60732 1142 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 IL1BP01584 269 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 CENPBP07199 599 aaPredicted RBP10.03□□□□□ -0.8
IFT88-203ENST00000389373 GOT1P17174 413 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 ASPAP45381 313 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 SNRPFP62306 86 aaKnown RBP10.03□□□□□ -0.8
IFT88-203ENST00000389373 PPP2CBP62714 309 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms