RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 MGAT5Q09328 741 aa12.69□□□□□ -0.38
SRGAP3-202ENST00000383836 NR6A1Q15406 480 aa12.69□□□□□ -0.38
SRGAP3-202ENST00000383836 MOSPD2Q8NHP6 518 aa12.69□□□□□ -0.38
SRGAP3-202ENST00000383836 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.69□□□□□ -0.38
SRGAP3-202ENST00000383836 UMODL1Q5DID0 1318 aa12.69□□□□□ -0.38
SRGAP3-202ENST00000383836 TMCC2O75069 709 aa12.69□□□□□ -0.38
SRGAP3-202ENST00000383836 HSF2Q03933 536 aa12.69□□□□□ -0.38
SRGAP3-202ENST00000383836 TNK2Q07912 1038 aa12.69□□□□□ -0.38
SRGAP3-202ENST00000383836 SLC44A2Q8IWA5 706 aaPredicted RBP12.69□□□□□ -0.38
SRGAP3-202ENST00000383836 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
SRGAP3-202ENST00000383836 DPPA5A6NC42 116 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 PLOD3O60568 738 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 ATP6V1G1O75348 118 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 MZF1P28698 734 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 BMPR2Q13873 1038 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 PKN1Q16512 942 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 TTC23Q5W5X9 447 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 LIN54Q6MZP7 749 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 MTMR8Q96EF0 704 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 ELOVL6Q9H5J4 265 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 GPAMQ9HCL2 828 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 AP3M1Q9Y2T2 418 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 FARP2O94887 1054 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 ARHGEF7Q14155 803 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 SPIDRQ14159 915 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 TTLL4Q14679 1199 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 MACC1Q6ZN28 852 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 RAVER2Q9HCJ3 691 aaKnown RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 AGPAT3Q9NRZ7 376 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 NINJ2Q9NZG7 142 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 BAIAP2Q9UQB8 552 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 FDPSP14324 419 aaKnown RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 PRDX5P30044 214 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 GRIA3P42263 894 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 GEMP55040 296 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 CACNB2Q08289 660 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 SCARA3Q6AZY7 606 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 TUBA3EQ6PEY2 450 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 UTS2BQ765I0 119 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 FNDC5Q8NAU1 212 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 MYLPFQ96A32 169 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 TLR10Q9BXR5 811 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 PHACTR1Q9C0D0 580 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 COA1Q9GZY4 146 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 GANQ9H2C0 597 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 RAPGEFL1Q9UHV5 662 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 SNX9Q9Y5X1 595 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 AP4B1Q9Y6B7 739 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 ZNF37AP17032 561 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 GMFBP60983 142 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 TBX2Q13207 712 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 BICRALQ6AI39 1079 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 AAGABQ6PD74 315 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 C10orf53Q8N6V4 93 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 PCDH12Q9NPG4 1184 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 WDR37Q9Y2I8 494 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 CPSF4O95639 269 aaKnown RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 MSLNQ13421 630 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 TSC22D1Q15714 1073 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 PIK3C3Q8NEB9 887 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 SPPL2AQ8TCT8 520 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 TEKT5Q96M29 485 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 SPATA33Q96N06 139 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 LOC110117498-PIK3R3F6TDL0 507 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 CRABP2P29373 138 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 PTPAQ15257 358 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 SAPCD2Q86UD0 394 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 PTCD3Q96EY7 689 aaKnown RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 TRMUO75648 421 aaKnown RBP12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 PDGFRBP09619 1106 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 FOSL2P15408 326 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 NEK3P51956 506 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 NAA20P61599 178 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 SPOCD1Q6ZMY3 1216 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 VN1R5Q7Z5H4 357 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 REEP1Q9H902 201 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 ADPRHL2Q9NX46 363 aa12.68□□□□□ -0.38
SRGAP3-202ENST00000383836 RPA1P27694 616 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 PPP2R1BP30154 601 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 DPYSQ14117 519 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 ZNF671Q8TAW3 534 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 C8orf4Q9NR00 106 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 SERPINA6P08185 405 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 ZNF12P17014 697 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 PSMD4P55036 377 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 GRIK3Q13003 919 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 NECAB2Q7Z6G3 386 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 HOXC10Q9NYD6 342 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 GNG14A0A1W2PPG7 69 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 TRDMT1O14717 391 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 ECDO95905 644 aaPredicted RBP12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 ELK3P41970 407 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 ILF2Q12905 390 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 CSHL1Q14406 222 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 ERICH5Q6P6B1 374 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 FAM126BQ8IXS8 530 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 AADATQ8N5Z0 425 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 HTRA1Q92743 480 aa12.67□□□□□ -0.38
SRGAP3-202ENST00000383836 OSBPL6Q9BZF3 934 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms