RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 LGI2Q8N0V4 545 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 CFAP52Q8N1V2 620 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 CPA6Q8N4T0 437 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 CSGALNACT1Q8TDX6 532 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 DNASE1L2Q92874 299 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 CHFRQ96EP1 664 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 TMA16Q96EY4 203 aaKnown RBP13.09□□□□□ -0.31
SMN2-203ENST00000380743 DDX50Q9BQ39 737 aaKnown RBP13.09□□□□□ -0.31
SMN2-203ENST00000380743 SNRNP25Q9BV90 132 aaKnown RBP13.09□□□□□ -0.31
SMN2-203ENST00000380743 HEBP1Q9NRV9 189 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 TRMT1Q9NXH9 659 aaKnown RBP13.09□□□□□ -0.31
SMN2-203ENST00000380743 VANGL2Q9ULK5 521 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 AP4E1Q9UPM8 1137 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 CAPN6Q9Y6Q1 641 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 MYOFQ9NZM1 2061 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 TICRRQ7Z2Z1 1910 aa13.09□□□□□ -0.31
SMN2-203ENST00000380743 NEDD8-MDP1E9PL57 170 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 F5H5T6 163 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 SRGAP2O75044 1071 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 PALMO75781 387 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 ADH1CP00326 375 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 ADH5P11766 374 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 TYRP14679 529 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 GJA4P35212 333 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 IRAK1P51617 712 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 RPS24P62847 133 aaKnown RBP13.08□□□□□ -0.31
SMN2-203ENST00000380743 PFKPQ01813 784 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 IFI16Q16666 785 aaKnown RBP13.08□□□□□ -0.31
SMN2-203ENST00000380743 HADHQ16836 314 aaKnown RBP13.08□□□□□ -0.31
SMN2-203ENST00000380743 ATP13A4Q4VNC1 1196 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 UBALD2Q8IYN6 164 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 KIAA1524Q8TCG1 905 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 DDI1Q8WTU0 396 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 HSPH1Q92598 858 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 IGSF8Q969P0 613 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 BBS2Q9BXC9 721 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 MARK1Q9P0L2 795 aa13.08□□□□□ -0.31
SMN2-203ENST00000380743 USP27XA6NNY8 438 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 E9PAM4 449 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 HOXC11O43248 304 aaPredicted RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 ZSCAN12O43309 604 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 SPOPO43791 374 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 TBL1XO60907 577 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 PENKP01210 267 aaPredicted RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 COL4A2P08572 1712 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 TNNT1P13805 278 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 HOXD9P28356 352 aaPredicted RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 L1CAMP32004 1257 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 GJC1P36383 396 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 NRG1Q02297 640 aaPredicted RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 GAD2Q05329 585 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 NR1H3Q13133 447 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 SEMA3BQ13214 749 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 MPPE1Q53F39 396 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 SLC44A4Q53GD3 710 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 ACBD5Q5T8D3 534 aaPredicted RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 NAIF1Q69YI7 327 aaPredicted RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 C12orf40Q86WS4 652 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 CIR1Q86X95 450 aaPredicted RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 PSTKQ8IV42 348 aaKnown RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 NAT16Q8N8M0 369 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 TEKT4Q8WW24 435 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 RPRD1AQ96P16 312 aaPredicted RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 KCTD15Q96SI1 283 aaPredicted RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 IRX2Q9BZI1 471 aaPredicted RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 DHX35Q9H5Z1 703 aaKnown RBP13.08□□□□□ -0.32
SMN2-203ENST00000380743 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMN2-203ENST00000380743 CLEC4EQ9ULY5 219 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 PIAS3Q9Y6X2 628 aa13.08□□□□□ -0.32
SMN2-203ENST00000380743 COL4A3Q01955 1670 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 IGLV3-10A0A075B6K4 115 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 SHISA7A6NL88 538 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 DRGXA6NNA5 263 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 CREB3O43889 395 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 CNTN5O94779 1100 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 LRIG2O94898 1065 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 CYBBP04839 570 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 KRT7P08729 469 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 SLC6A11P48066 632 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 DPYSL2Q16555 572 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 PPP6R3Q5H9R7 873 aaPredicted RBP13.07□□□□□ -0.32
SMN2-203ENST00000380743 RABGAP1LQ5R372 815 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 MPP7Q5T2T1 576 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 RNF43Q68DV7 783 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 LRRC31Q6UY01 552 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 POLNQ7Z5Q5 900 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 CCAR2Q8N163 923 aaKnown RBP13.07□□□□□ -0.32
SMN2-203ENST00000380743 HJURPQ8NCD3 748 aaPredicted RBP13.07□□□□□ -0.32
SMN2-203ENST00000380743 CD101Q93033 1021 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 KLHL11Q9NVR0 708 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 MPP6Q9NZW5 540 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 STIM2Q9P246 746 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 CA14Q9ULX7 337 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 NEU3Q9UQ49 428 aa13.07□□□□□ -0.32
SMN2-203ENST00000380743 F5P12259 2224 aa13.06□□□□□ -0.32
SMN2-203ENST00000380743 SPECC1L-ADORA2AF8WAN1 911 aa13.06□□□□□ -0.32
SMN2-203ENST00000380743 TRIM24O15164 1050 aa13.06□□□□□ -0.32
SMN2-203ENST00000380743 CACNG3O60359 315 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms