RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 C1orf146Q5VVC0 180 aa15.84■□□□□ 0.13
RER1-203ENST00000378513 ATG16L1Q676U5 607 aa15.84■□□□□ 0.13
RER1-203ENST00000378513 PID1Q7Z2X4 250 aa15.84■□□□□ 0.13
RER1-203ENST00000378513 PLD6Q8N2A8 252 aaKnown RBP15.84■□□□□ 0.13
RER1-203ENST00000378513 KBTBD7Q8WVZ9 684 aa15.84■□□□□ 0.13
RER1-203ENST00000378513 PYDC1Q8WXC3 89 aa15.84■□□□□ 0.13
RER1-203ENST00000378513 ZNF333Q96JL9 665 aa15.84■□□□□ 0.13
RER1-203ENST00000378513 VCXQ9H320 206 aa15.84■□□□□ 0.13
RER1-203ENST00000378513 VRTNQ9H8Y1 702 aa15.84■□□□□ 0.13
RER1-203ENST00000378513 SLC7A8Q9UHI5 535 aa15.84■□□□□ 0.13
RER1-203ENST00000378513 PCDHA11Q9Y5I1 949 aa15.84■□□□□ 0.13
RER1-203ENST00000378513 MEIS3P2A8K0S8 358 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 SPAG6O75602 509 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 GSRP00390 522 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 ATXN3P54252 364 aaPredicted RBP15.83■□□□□ 0.12
RER1-203ENST00000378513 RASIP1Q5U651 963 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 EXOC8Q8IYI6 725 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 PNPLA1Q8N8W4 532 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 ZFP42Q96MM3 310 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 ANLNQ9NQW6 1124 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 STOML1Q9UBI4 398 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 PPM1HQ9ULR3 514 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 RPS6KL1Q9Y6S9 549 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 ZNF638Q14966 1978 aaKnown RBP15.83■□□□□ 0.12
RER1-203ENST00000378513 PTPRFP10586 1907 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 CAPN14A8MX76 684 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 M0QYT0 321 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 SMPD1P17405 629 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 ARL4AP40617 200 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 RANBP1P43487 201 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 CACNA2D1P54289 1103 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 DPYSL2Q16555 572 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 C9orf57Q5W0N0 161 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 PACS1Q6VY07 963 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 ULK2Q8IYT8 1036 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 GBP5Q96PP8 586 aa15.83■□□□□ 0.12
RER1-203ENST00000378513 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.83■□□□□ 0.12
RER1-203ENST00000378513 WDR90Q96KV7 1748 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 GOLGA8QA0A0J9YX86 632 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 GOLGA8OA6NCC3 632 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 GOLGA8NF8WBI6 632 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 MDM4O15151 490 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 TGDSO95455 350 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 TYK2P29597 1187 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 MSX2P35548 267 aaPredicted RBP15.82■□□□□ 0.12
RER1-203ENST00000378513 AFF1P51825 1210 aaKnown RBP15.82■□□□□ 0.12
RER1-203ENST00000378513 IRF9Q00978 393 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 LAMC2Q13753 1193 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 HIC1Q14526 733 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 MAVSQ7Z434 540 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 KDELC2Q7Z4H8 507 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 RASSF3Q86WH2 238 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 SCUBE1Q8IWY4 988 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 ANKRD13AQ8IZ07 590 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 DNAJB3Q8WWF6 145 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 RTP4Q96DX8 246 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 FCRL3Q96P31 734 aaPredicted RBP15.82■□□□□ 0.12
RER1-203ENST00000378513 RHOBTB2Q9BYZ6 727 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 SNX25Q9H3E2 840 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 PNPLA8Q9NP80 782 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 KCNK4Q9NYG8 393 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 SPECC1L-ADORA2AF8WAN1 911 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 SMAPO00193 183 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 DYNC1LI2O43237 492 aaPredicted RBP15.82■□□□□ 0.12
RER1-203ENST00000378513 DNAJC6O75061 913 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 VHLP40337 213 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 SLC1A6P48664 564 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 DPY19L2Q6NUT2 758 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 LINC01465Q8N7H1 131 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 ARNTL2Q8WYA1 636 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 QKIQ96PU8 341 aaKnown RBP eCLIP15.82■□□□□ 0.12
RER1-203ENST00000378513 WWP1Q9H0M0 922 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 KRT82Q9NSB4 513 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.82■□□□□ 0.124e-16■□□□□ 9
RER1-203ENST00000378513 RNF181Q9P0P0 153 aa15.82■□□□□ 0.12
RER1-203ENST00000378513 GCATO75600 419 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 MAP3K7CLP57077 242 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 SLC34A1Q06495 639 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 FAM187BQ17R55 369 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 FBXO47Q5MNV8 452 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 CWF19L1Q69YN2 538 aaKnown RBP15.81■□□□□ 0.12
RER1-203ENST00000378513 DPP9Q86TI2 863 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 OSTM1Q86WC4 334 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 ZNF567Q8N184 647 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 SPATA6LQ8N4H0 392 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 PPFIBP2Q8ND30 876 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 USP33Q8TEY7 942 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 EDEM1Q92611 657 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 MFSD3Q96ES6 412 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 hCG_2014768A0A024R1R8 64 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 KPNA7A9QM74 516 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 E9PBE3 544 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 I6L893 689 aaPredicted RBP15.81■□□□□ 0.12
RER1-203ENST00000378513 NEMP1O14524 444 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 TRDMT1O14717 391 aaKnown RBP15.81■□□□□ 0.12
RER1-203ENST00000378513 AHCYL1O43865 530 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 KLHL41O60662 606 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 SNAI1O95863 264 aaPredicted RBP15.81■□□□□ 0.12
RER1-203ENST00000378513 ITGA2BP08514 1039 aa15.81■□□□□ 0.12
RER1-203ENST00000378513 FGF3P11487 239 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms