RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 SLC2A14Q8TDB8 520 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 P2RY11Q96G91 374 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 GINS2Q9Y248 185 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 LRCH1Q9Y2L9 728 aa18.7■□□□□ 0.58
TDP2-202ENST00000378198 XPOTO43592 962 aaKnown RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 RECQL4O94761 1208 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 ITGA2BP08514 1039 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 RPL10AP62906 217 aaKnown RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 CRADDP78560 199 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 PDE1BQ01064 536 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 LBRQ14739 615 aaKnown RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 IRGCQ6NXR0 463 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 APLFQ8IW19 511 aaPredicted RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 APPL2Q8NEU8 664 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 FBXO27Q8NI29 283 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 RNF139Q8WU17 664 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 FAM136AQ96C01 138 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 TNIP3Q96KP6 325 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 APOL6Q9BWW8 343 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 DNAJC16Q9Y2G8 782 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 TSC2P49815 1807 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 F5H423 210 aaPredicted RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 PPP1R12AO14974 1030 aaPredicted RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 ITM2AO43736 263 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 GPR32O75388 356 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 SKAP2O75563 359 aaPredicted RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 ZNF189O75820 626 aaPredicted RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 NEBLO76041 1014 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 KLHL2O95198 593 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 SNAI1O95863 264 aaPredicted RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 SERPINE1P05121 402 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 POLBP06746 335 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 GRK2P25098 689 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 GARSP41250 739 aaKnown RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 MXRA7P84157 204 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 TMEM62Q0P6H9 643 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 DGKDQ16760 1214 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 ULK2Q8IYT8 1036 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 DTX3LQ8TDB6 740 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 FAM149B1Q96BN6 582 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 TSPAN18Q96SJ8 248 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 THTPAQ9BU02 230 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 NXF3Q9H4D5 531 aaKnown RBP18.69■□□□□ 0.58
TDP2-202ENST00000378198 SETD4Q9NVD3 440 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 TXNDC16Q9P2K2 825 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 GJD2Q9UKL4 321 aa18.69■□□□□ 0.58
TDP2-202ENST00000378198 PDHA1P08559 390 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 PSMB4P28070 264 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 NOS2P35228 1153 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 TAF6P49848 677 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 IFRD2Q12894 506 aaPredicted RBP18.68■□□□□ 0.58
TDP2-202ENST00000378198 SNAPC2Q13487 334 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 TUBB3Q13509 450 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 PCLAFQ15004 111 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 PAFAH1B3Q15102 231 aaKnown RBP18.68■□□□□ 0.58
TDP2-202ENST00000378198 SPANXN3Q5MJ09 141 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 LIMS2Q7Z4I7 341 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 PIGZQ86VD9 579 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 PPP4R1Q8TF05 950 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 FAM49AQ9H0Q0 323 aaPredicted RBP18.68■□□□□ 0.58
TDP2-202ENST00000378198 SYBUQ9NX95 663 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 IGSF9Q9P2J2 1179 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 SLC17A6Q9P2U8 582 aa18.68■□□□□ 0.58
TDP2-202ENST00000378198 APOBEC2Q9Y235 224 aaKnown RBP18.68■□□□□ 0.58
TDP2-202ENST00000378198 SMIM28A0A1B0GU29 152 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 SPTLC1O15269 473 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 MAP3K7O43318 606 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 STRNO43815 780 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 LYPLA1O75608 230 aaPredicted RBP18.67■□□□□ 0.58
TDP2-202ENST00000378198 AXLP30530 894 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 UBAP2LQ14157 1087 aaKnown RBP18.67■□□□□ 0.58
TDP2-202ENST00000378198 SV2CQ496J9 727 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 DUSP28Q4G0W2 176 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 DCAF6Q58WW2 860 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 GRTP1Q5TC63 336 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 BNIPLQ7Z465 357 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 RASSF3Q86WH2 238 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 CCNYQ8ND76 341 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 NT5C3BQ969T7 300 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 PGBD4Q96DM1 585 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 ZNF778Q96MU6 729 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 NPY6RQ99463 290 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 HNRNPABQ99729 332 aaKnown RBP18.67■□□□□ 0.58
TDP2-202ENST00000378198 CDHR5Q9HBB8 845 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 DNAJB4Q9UDY4 337 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 STAP1Q9ULZ2 295 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 SOX13Q9UN79 622 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 PROCP04070 461 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 SMPD1P17405 629 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 KCNA4P22459 653 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 AKAP5P24588 427 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 GP5P40197 560 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 ACTR3P61158 418 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 ADIGQ0VDE8 80 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 ZNF618Q5T7W0 954 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 RIPOR1Q6ZS17 1223 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 MYLK4Q86YV6 388 aaPredicted RBP18.67■□□□□ 0.58
TDP2-202ENST00000378198 ZNF567Q8N184 647 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 NME8Q8N427 588 aa18.67■□□□□ 0.58
TDP2-202ENST00000378198 OR6J1Q8NGC5 347 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms