RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 TGM2P21980 687 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 ATXN1P54253 815 aaKnown RBP14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 PDK3Q15120 406 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 BSPRYQ5W0U4 402 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 PDPK2PQ6A1A2 396 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 ARHGAP22Q7Z5H3 698 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 ZBTB8OSQ8IWT0 167 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 FBXO16Q8IX29 292 aaPredicted RBP14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 SCUBE3Q8IX30 993 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 ACTRT2Q8TDY3 377 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 GCNAQ96QF7 691 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 RNPEPQ9H4A4 650 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 PTPRHQ9HD43 1115 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 XPNPEP3Q9NQH7 507 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 CLIC5Q9NZA1 410 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 ABT1Q9ULW3 272 aaKnown RBP14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 MFHAS1Q9Y4C4 1052 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 LACTBL1A8MY62 500 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 DCXO43602 365 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 ATP5BP06576 529 aaKnown RBP14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 SESN2P58004 480 aaPredicted RBP14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 USP4Q13107 963 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 PDK2Q15119 407 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 GRAMD1BQ3KR37 738 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 BOLA3Q53S33 107 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 JADE1Q6IE81 842 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 TIFABQ6ZNK6 161 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 NAT14Q8WUY8 206 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 NMD3Q96D46 503 aaKnown RBP14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 MINDY3Q9H8M7 445 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 RPF1Q9H9Y2 349 aaKnown RBP14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 TMEM216Q9P0N5 145 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 ITGA11Q9UKX5 1188 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 CAPN8A6NHC0 703 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 ZNF195O14628 629 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 PFKMP08237 780 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 PROZP22891 400 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 CYP2F1P24903 491 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 NDST1P52848 882 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 LSAMPQ13449 338 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 IER5Q5VY09 327 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 ARMC3Q5W041 872 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 KCNT2Q6UVM3 1135 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 CES3Q6UWW8 571 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 PACS1Q6VY07 963 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 CDT1Q9H211 546 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 VCX3BQ9H321 246 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 NRDE2Q9H7Z3 1164 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 IFT122Q9HBG6 1241 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 VCX3AQ9NNX9 186 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 TSPAN16Q9UKR8 245 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 PCDHGB4Q9UN71 923 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 SLC45A1Q9Y2W3 748 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 PCDHGB5Q9Y5G0 923 aa14.51□□□□□ -0.09
CLCNKA-202ENST00000375692 BRCA2P51587 3418 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 H3BNX3 289 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 GPR25O00155 361 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 SERPINE1P05121 402 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 IQCF3P0C7M6 154 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 PABPC4LP0CB38 370 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 ICAM3P32942 547 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 FOLH1Q04609 750 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 TBL3Q12788 808 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 ITGA9Q13797 1035 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 TSHZ1Q6ZSZ6 1077 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 TNS4Q8IZW8 715 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 AGR3Q8TD06 166 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 OLFM3Q96PB7 478 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 HAPLN3Q96S86 360 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 CCDC28BQ9BUN5 200 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 B3GNT5Q9BYG0 378 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 MCM3APO60318 1980 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 SF3B1O75533 1304 aaKnown RBP eCLIP14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 FAM155AB1AL88 458 aaPredicted RBP14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 E9PBE3 544 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 ZBTB14O43829 449 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 KLHL41O60662 606 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 GCATO75600 419 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 VDRP11473 427 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 BTKQ06187 659 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 GRM2Q14416 872 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 GJC2Q5T442 439 aaPredicted RBP14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 PMF1Q6P1K2 205 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 UGT2A3Q6UWM9 527 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 PPP4R1Q8TF05 950 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 COPS5Q92905 334 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 KHSRPQ92945 711 aaKnown RBP eCLIP14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 MOCOSQ96EN8 888 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 PPP1R16BQ96T49 567 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 PARK7Q99497 189 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 CEP41Q9BYV8 373 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 DHX35Q9H5Z1 703 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 ACSS2Q9NR19 701 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 INPP5FQ9Y2H2 1132 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 COMMD3-BMI1R4GMX3 469 aa14.5□□□□□ -0.09
CLCNKA-202ENST00000375692 GLRA3O75311 464 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 MSX2P35548 267 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 STILQ15468 1287 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 PDCD2Q16342 344 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 GPR142Q7Z601 462 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms