RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CRADDP78560 199 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 CNTN2Q02246 1040 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 PAN2Q504Q3 1202 aaKnown RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 CLNKQ7Z7G1 428 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 TERB1Q8NA31 727 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 REPS2Q8NFH8 660 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 ZSCAN18Q8TBC5 510 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 USP6NLQ92738 828 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 DLG3Q92796 817 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 NSMCE2Q96MF7 247 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 SPATA13Q96N96 652 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 UTP6Q9NYH9 597 aaKnown RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 ABT1Q9ULW3 272 aaKnown RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 COG5Q9UP83 839 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 NDUFAF1Q9Y375 327 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 NID2Q14112 1375 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 ANPEPP15144 967 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 DDX5P17844 614 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 YY1P25490 414 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 CCR1P32246 355 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 CSE1LP55060 971 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 CSTF3Q12996 717 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 SNX17Q15036 470 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 GSTA3Q16772 222 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 DEPDC1Q5TB30 811 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 LLGL2Q6P1M3 1020 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 ECHDC2Q86YB7 292 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 ELMOD1Q8N336 334 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 MAGEC3Q8TD91 643 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 SLC2A14Q8TDB8 520 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 TLCD1Q96CP7 247 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 PRKD2Q9BZL6 878 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 RAD54BQ9Y620 910 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 RIMS1Q86UR5 1692 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 PPP1R11O60927 126 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 SNHG28P0DPA3 235 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 LHX1P48742 406 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 PSMD7P51665 324 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 OAZ1P54368 228 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 ROR2Q01974 943 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 TAF1CQ15572 869 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 ACBD5Q5T8D3 534 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 DHDDSQ86SQ9 333 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 IL31RAQ8NI17 732 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 FAM84AQ96KN4 292 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 BDH2Q9BUT1 245 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 GRIP2Q9C0E4 1043 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 MROH8Q9H579 483 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 PIF1Q9H611 641 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 WDR41Q9HAD4 459 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 LSM7Q9UK45 103 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 AHCYL1O43865 530 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 CYBBP04839 570 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 ACAT1P24752 427 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 DNAJB2P25686 324 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 NCKAP1LP55160 1127 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 SYTL3Q4VX76 610 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 AARS2Q5JTZ9 985 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 MARC1Q5VT66 337 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 TTC27Q6P3X3 843 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 ADAM32Q8TC27 787 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 ACMSDQ8TDX5 336 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 PPP1R10Q96QC0 940 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 PHACTR1Q9C0D0 580 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 ATXN3LQ9H3M9 355 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 TBC1D13Q9NVG8 400 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 MCM8Q9UJA3 840 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 WNT10BO00744 389 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 LDLRP01130 860 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 NR6A1Q15406 480 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 OTULINQ96BN8 352 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 PARK7Q99497 189 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 VAT1Q99536 393 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 SNRNP25Q9BV90 132 aaKnown RBP11.79□□□□□ -0.52
PTCH1-203ENST00000375274 MRIQ9BWK5 157 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 RRN3Q9NYV6 651 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 SLC17A7Q9P2U7 560 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 PACSIN3Q9UKS6 424 aa11.79□□□□□ -0.52
PTCH1-203ENST00000375274 PLA2G6O60733 806 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 PGM3O95394 542 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 THP07101 528 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 CCDC159P0C7I6 412 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 ALDH1A3P47895 512 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 TRAF2Q12933 501 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 MARK2Q7KZI7 788 aaKnown RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 NT5DC4Q86YG4 428 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 PCDH20Q8N6Y1 951 aaKnown RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 GLMNQ92990 594 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 CERS2Q96G23 380 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 EBNA1BP2Q99848 306 aaKnown RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 SH3GL1Q99961 368 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 KCTD14Q9BQ13 255 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 SYT15Q9BQS2 421 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 A0A087WXM4 84 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 TMEM191CA6NGB0 347 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 SPDYE5A6NIY4 337 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 ZMPSTE24O75844 475 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 WFS1O76024 890 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 BCL10O95999 233 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 NUMBP49757 651 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms