RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 DEFB106AQ8N104 65 aa13.68□□□□□ -0.22
A1CF-204ENST00000373997 PDIK1LQ8N165 341 aa13.68□□□□□ -0.22
A1CF-204ENST00000373997 ZNF276Q8N554 614 aa13.68□□□□□ -0.22
A1CF-204ENST00000373997 NAF1Q96HR8 494 aaKnown RBP13.68□□□□□ -0.22
A1CF-204ENST00000373997 PAWRQ96IZ0 340 aaKnown RBP13.68□□□□□ -0.22
A1CF-204ENST00000373997 PKMYT1Q99640 499 aa13.68□□□□□ -0.22
A1CF-204ENST00000373997 CALN1Q9BXU9 219 aa13.68□□□□□ -0.22
A1CF-204ENST00000373997 ADAM33Q9BZ11 813 aa13.68□□□□□ -0.22
A1CF-204ENST00000373997 NPHS2Q9NP85 383 aa13.68□□□□□ -0.22
A1CF-204ENST00000373997 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.68□□□□□ -0.22
A1CF-204ENST00000373997 TBX21Q9UL17 535 aa13.68□□□□□ -0.22
A1CF-204ENST00000373997 NT5C1B-RDH14C9J2C7 533 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 GOLGA8MH3BSY2 632 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 CST8O60676 142 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 DAB1O75553 588 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 TGDSO95455 350 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 SSTR1P30872 391 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 RPL22P35268 128 aaKnown RBP13.67□□□□□ -0.22
A1CF-204ENST00000373997 SLC11A1P49279 550 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 LBX1P52954 281 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 CDH6P55285 790 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 FNBP1LQ5T0N5 605 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.67□□□□□ -0.22
A1CF-204ENST00000373997 HFE2Q6ZVN8 426 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 CHSY1Q86X52 802 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 PALM2Q8IXS6 379 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 FBXO36Q8NEA4 188 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 DCAKDQ8WVC6 231 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 ARMC5Q96C12 935 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 MRRFQ96E11 262 aaKnown RBP13.67□□□□□ -0.22
A1CF-204ENST00000373997 B3GALT6Q96L58 329 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 NUDCD1Q96RS6 583 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 CYTH2Q99418 400 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 TBCBQ99426 244 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 TRIM55Q9BYV6 548 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 MANSC1Q9H8J5 431 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 NKX1-2Q9UD57 310 aaPredicted RBP13.67□□□□□ -0.22
A1CF-204ENST00000373997 ADAM28Q9UKQ2 775 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 CORO1CQ9ULV4 474 aaPredicted RBP13.67□□□□□ -0.22
A1CF-204ENST00000373997 KIAA1671Q9BY89 1806 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 MKI67P46013 3256 aaKnown RBP13.67□□□□□ -0.22
A1CF-204ENST00000373997 SYNJ2BP-COX16A0A087WUM0 186 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 IQANK1A0A1B0GTG1 560 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 HOXA2O43364 376 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 DNAJC6O75061 913 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 SPAG6O75602 509 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 SMNDC1O75940 238 aaKnown RBP eCLIP13.67□□□□□ -0.22
A1CF-204ENST00000373997 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
A1CF-204ENST00000373997 CBX6O95503 412 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 IL1BP01584 269 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 CLTBP09497 229 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 USP17L7P0C7H9 530 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 EPHB2P29323 1055 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 PTPN9P43378 593 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 GJA8P48165 433 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 SULT1E1P49888 294 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 HDAC4P56524 1084 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 MMRN1Q13201 1228 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 LRRC26Q2I0M4 334 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 CTC1Q2NKJ3 1217 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 SLC39A12Q504Y0 691 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 ANKRD22Q5VYY1 191 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 RFX6Q8HWS3 928 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.67□□□□□ -0.22
A1CF-204ENST00000373997 DNAJC5GQ8N7S2 189 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 TCP10LQ8TDR4 215 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 SNRNP25Q9BV90 132 aaKnown RBP13.67□□□□□ -0.22
A1CF-204ENST00000373997 C11orf49Q9H6J7 331 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 PRDM5Q9NQX1 630 aaPredicted RBP13.67□□□□□ -0.22
A1CF-204ENST00000373997 COX16Q9P0S2 106 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 GREB1Q4ZG55 1949 aa13.67□□□□□ -0.22
A1CF-204ENST00000373997 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.66□□□□□ -0.22
A1CF-204ENST00000373997 HHLA1C9JL84 531 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 CCDC22O60826 627 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 BANF1O75531 89 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 PITX1P78337 314 aaPredicted RBP13.66□□□□□ -0.22
A1CF-204ENST00000373997 IFRD2Q12894 506 aaPredicted RBP13.66□□□□□ -0.22
A1CF-204ENST00000373997 CBLBQ13191 982 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 KRT81Q14533 505 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 EFTUD2Q15029 972 aaKnown RBP eCLIP13.66□□□□□ -0.22
A1CF-204ENST00000373997 MSS51Q4VC12 460 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 DCAF6Q58WW2 860 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 FAM171A1Q5VUB5 890 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 MTDHQ86UE4 582 aaKnown RBP13.66□□□□□ -0.22
A1CF-204ENST00000373997 SPATA2LQ8IUW3 424 aaPredicted RBP13.66□□□□□ -0.22
A1CF-204ENST00000373997 KIRREL3Q8IZU9 778 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 WDR83Q9BRX9 315 aaKnown RBP13.66□□□□□ -0.22
A1CF-204ENST00000373997 MRPL9Q9BYD2 267 aaKnown RBP13.66□□□□□ -0.22
A1CF-204ENST00000373997 DCLRE1BQ9H816 532 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 DMAP1Q9NPF5 467 aaPredicted RBP13.66□□□□□ -0.22
A1CF-204ENST00000373997 MARCH5Q9NX47 278 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 MTO1Q9Y2Z2 717 aaKnown RBP13.66□□□□□ -0.22
A1CF-204ENST00000373997 PLXNA3P51805 1871 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 APOC4-APOC2K7ER74 178 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 HAUS5O94927 633 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 FBXO21O94952 628 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 APOC2P02655 101 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 MT-ND3P03897 115 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 DHRS4L1P0CG22 281 aa13.66□□□□□ -0.22
A1CF-204ENST00000373997 GM2AP17900 193 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms