RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 MKS1Q9NXB0 559 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 ZDHHC7Q9NXF8 308 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 PCDHB12Q9Y5F1 795 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 A0A0G2JND7 137 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 TCRBV5S1A1TA0A578 114 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 F8W810 466 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 NRP1O14786 923 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 TM7SF2O76062 418 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 C4BPAP04003 597 aaKnown RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 LINC00271P0C7V0 271 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 LAG3P18627 525 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 MMP8P22894 467 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 GNA15P30679 374 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 BMPR1AP36894 532 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 CDKN2BP42772 138 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 CLCNKBP51801 687 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 DSG1Q02413 1049 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 DSC1Q08554 894 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 CUL2Q13617 745 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 HNRNPDQ14103 355 aaKnown RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 SURF1Q15526 300 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 ZBTB6Q15916 424 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 RNF220Q5VTB9 566 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 C3orf62Q6ZUJ4 267 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 MYLK4Q86YV6 388 aaPredicted RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 PALM2Q8IXS6 379 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 PDIK1LQ8N165 341 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 GLIS1Q8NBF1 620 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 DRAXINQ8NBI3 349 aaPredicted RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 COLGALT1Q8NBJ5 622 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 STKLD1Q8NE28 680 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 BEST2Q8NFU1 509 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 CLP1Q92989 425 aaKnown RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 PPP2R3CQ969Q6 453 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 FAM161BQ96MY7 647 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 ZNF558Q96NG5 402 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 CENPKQ9BS16 269 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 WWP1Q9H0M0 922 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 ZNF576Q9H609 170 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 KRT82Q9NSB4 513 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 NDUFA13Q9P0J0 144 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 DCTN4Q9UJW0 460 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 UBQLN1Q9UMX0 589 aaKnown RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 CAPN14A8MX76 684 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 SGK1O00141 431 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 FCHO1O14526 889 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 XPOTO43592 962 aaKnown RBP11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 AP1G2O75843 785 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 CSPG5O95196 566 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 HLA-DRAP01903 254 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 ZSCAN5DPP0CG00 497 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 IGFBP6P24592 240 aaPredicted RBP11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 PIK3CAP42336 1068 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 SSR1P43307 286 aaKnown RBP11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 ACTR3P61158 418 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 ERVK-21P61565 698 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 TAZQ16635 292 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 ATG16L1Q676U5 607 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 SH2D5Q6ZV89 423 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 PHLDB2Q86SQ0 1253 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 TMEM173Q86WV6 379 aaPredicted RBP11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 SCUBE1Q8IWY4 988 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 KLHL23Q8NBE8 558 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 OR5B17Q8NGF7 314 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 HASPINQ8TF76 798 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 WDR60Q8WVS4 1066 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 SLC44A1Q8WWI5 657 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 CPT1BQ92523 772 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 TMEM175Q9BSA9 504 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 MTMR12Q9C0I1 747 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 MIS12Q9H081 205 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 DPP3Q9NY33 737 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 TAGLN3Q9UI15 199 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 ZNF180Q9UJW8 692 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 TBC1D30Q9Y2I9 924 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 DERAQ9Y315 318 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 NUMBLQ9Y6R0 609 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 PTPRJQ12913 1337 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 LAMA3Q16787 3333 aa11.81□□□□□ -0.52
TSPAN1-201ENST00000372003 COL4A6Q14031 1691 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 SPECC1L-ADORA2AF8WAN1 911 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 RFXAPO00287 272 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 TADA2AO75478 443 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 RNF8O76064 485 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 B3GAT3O94766 335 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 LYNP07948 512 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 KRT19P08727 400 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 KRT10P13645 584 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 ANPEPP15144 967 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 SESN3P58005 492 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 NOP14P78316 857 aaKnown RBP11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 THOC5Q13769 683 aaKnown RBP11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 DUOXA2Q1HG44 320 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 LGSNQ5TDP6 509 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 KAZNQ674X7 775 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 SCARA3Q6AZY7 606 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 BBS12Q6ZW61 710 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 LRRC6Q86X45 466 aa11.8□□□□□ -0.52
TSPAN1-201ENST00000372003 WDR49Q8IV35 697 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms