RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 FAM72DQ6L9T8 149 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 GPRIN1Q7Z2K8 1008 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 FAM72BQ86X60 149 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 TP53INP2Q8IXH6 220 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 LPPQ93052 612 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 E2F7Q96AV8 911 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 PGBD4Q96DM1 585 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 TRAFD1O14545 582 aaPredicted RBP29.75■■■□□ 2.35
SSBP3-204ENST00000371320 USP17L7P0C7H9 530 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 CCDC91Q7Z6B0 441 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 NUDCD3Q8IVD9 361 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 TBC1D10AQ9BXI6 508 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 WDR6Q9NNW5 1121 aaKnown RBP29.75■■■□□ 2.35
SSBP3-204ENST00000371320 MIOSQ9NXC5 875 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 SIRPGQ9P1W8 387 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 L3MBTL1Q9Y468 752 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 C9IYK1 514 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 HNRNPCL1O60812 293 aaKnown RBP29.75■■■□□ 2.35
SSBP3-204ENST00000371320 HAUS5O94927 633 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 NCAM1P13591 858 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 AKR1A1P14550 325 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 ERCC2P18074 760 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 GJA9P57773 515 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 NIPAL4Q0D2K0 466 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 CST9Q5W186 159 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 PID1Q7Z2X4 250 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 RSPH3Q86UC2 560 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 ZMIZ2Q8NF64 920 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 ARNTL2Q8WYA1 636 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 NAT9Q9BTE0 207 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 IGSF9Q9P2J2 1179 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 LNPEPQ9UIQ6 1025 aa29.75■■■□□ 2.35
SSBP3-204ENST00000371320 CTSHP09668 335 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 SERPINB3P29508 390 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 TPI1P60174 286 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 BST1Q10588 318 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 SCAPQ12770 1279 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 CRYMQ14894 314 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 CHI3L2Q15782 390 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 C17orf99Q6UX52 265 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 LONP2Q86WA8 852 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 FBXW11Q9UKB1 542 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 CDH9Q9ULB4 789 aa29.74■■■□□ 2.35
SSBP3-204ENST00000371320 KCNK1O00180 336 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 DNAJC6O75061 913 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 IBSPP21815 317 aaPredicted RBP29.73■■■□□ 2.35
SSBP3-204ENST00000371320 PTPN4P29074 926 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 CACNA2D1P54289 1103 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 RAB41Q5JT25 222 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 GNASQ5JWF2 1037 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 C3orf58Q8NDZ4 430 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 STKLD1Q8NE28 680 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 SOCS4Q8WXH5 440 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 SKA1Q96BD8 255 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 C7orf26Q96N11 449 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 MTG1Q9BT17 334 aaPredicted RBP29.73■■■□□ 2.35
SSBP3-204ENST00000371320 TUBB6Q9BUF5 446 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 ANLNQ9NQW6 1124 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 CHST12Q9NRB3 414 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 TMEM30AQ9NV96 361 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 DDIT4Q9NX09 232 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 KLHL8Q9P2G9 620 aaPredicted RBP29.73■■■□□ 2.35
SSBP3-204ENST00000371320 SLC17A6Q9P2U8 582 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 PTCH2Q9Y6C5 1203 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 ARL5CA6NH57 179 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 KPNA6O60684 536 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 LTFP02788 710 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 MYL2P10916 166 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 SEMA3BQ13214 749 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 SYBUQ9NX95 663 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 RAD54BQ9Y620 910 aa29.73■■■□□ 2.35
SSBP3-204ENST00000371320 CCDC195A0A1B0GUA6 201 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 DUSP11O75319 330 aaKnown RBP29.72■■■□□ 2.35
SSBP3-204ENST00000371320 ZNF189O75820 626 aaPredicted RBP29.72■■■□□ 2.35
SSBP3-204ENST00000371320 WFS1O76024 890 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 IGHA2P01877 340 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 PACS1Q6VY07 963 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 FBXO6Q9NRD1 293 aaPredicted RBP29.72■■■□□ 2.35
SSBP3-204ENST00000371320 FAM237BA0A1B0GVD1 139 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 MANSC4A6NHS7 340 aaPredicted RBP29.72■■■□□ 2.35
SSBP3-204ENST00000371320 I6L893 689 aaPredicted RBP29.72■■■□□ 2.35
SSBP3-204ENST00000371320 SCNN1GP51170 649 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 NAB1Q13506 487 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 ARL13BQ3SXY8 428 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 RAB3IL1Q8TBN0 382 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 PGAP3Q96FM1 320 aaPredicted RBP29.72■■■□□ 2.35
SSBP3-204ENST00000371320 RRAGCQ9HB90 399 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 XPNPEP3Q9NQH7 507 aa29.72■■■□□ 2.35
SSBP3-204ENST00000371320 MYO18AQ92614 2054 aaKnown RBP29.71■■■□□ 2.35
SSBP3-204ENST00000371320 CASTOR2A6NHX0 329 aa29.71■■■□□ 2.35
SSBP3-204ENST00000371320 TNPO2O14787 897 aaKnown RBP29.71■■■□□ 2.35
SSBP3-204ENST00000371320 BIRC5O15392 142 aa29.71■■■□□ 2.35
SSBP3-204ENST00000371320 BPGMP07738 259 aa29.71■■■□□ 2.35
SSBP3-204ENST00000371320 EPHB2P29323 1055 aa29.71■■■□□ 2.35
SSBP3-204ENST00000371320 HCAR3P49019 387 aa29.71■■■□□ 2.35
SSBP3-204ENST00000371320 ZNF157P51786 506 aaPredicted RBP29.71■■■□□ 2.35
SSBP3-204ENST00000371320 GDF6Q6KF10 455 aaPredicted RBP29.71■■■□□ 2.35
SSBP3-204ENST00000371320 CXCL17Q6UXB2 119 aa29.71■■■□□ 2.35
SSBP3-204ENST00000371320 CTU1Q7Z7A3 348 aaKnown RBP29.71■■■□□ 2.35
SSBP3-204ENST00000371320 ACMSDQ8TDX5 336 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms