RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PAIP2BQ9ULR5 123 aaKnown RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 MAGEA13PA6NCF6 341 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 SNRPFP62306 86 aaKnown RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 MARC1Q5VT66 337 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 ZBTB49Q6ZSB9 765 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 TMEM159Q96B96 161 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 CYLDQ9NQC7 956 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 VPS45Q9NRW7 570 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 A0A0A6YYK5 440 aaPredicted RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 TISP43B9A030 160 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 AKAP3O75969 853 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 PEX5P50542 639 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 HIRAP54198 1017 aaPredicted RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 C16orf46Q6P387 395 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 TRAPPC5Q8IUR0 188 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 GPSM3Q9Y4H4 160 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 TULP4Q9NRJ4 1543 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 FAM220BPB1ANY3 271 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 KCNK1O00180 336 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 ADSLP30566 484 aaPredicted RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 PRKAA1Q13131 559 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 ZNF470Q6ECI4 717 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 R3HCC1LQ7Z5L2 792 aaKnown RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 CXorf56Q9H5V9 222 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 ADARB2Q9NS39 739 aaKnown RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 WHRNQ9P202 907 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 HNF4AP41235 474 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 PPM1LQ5SGD2 360 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 SLC5A5Q92911 643 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 PABPC3Q9H361 631 aaKnown RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 TBC1D13Q9NVG8 400 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 DAPK2Q9UIK4 370 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 COG5Q9UP83 839 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 ACOT9Q9Y305 439 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 SSTR1P30872 391 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 FASTKQ14296 549 aaKnown RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 CYP4Z2PQ8N1L4 340 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 SLC2A14Q8TDB8 520 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 GPR152Q8TDT2 470 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 ZNF624Q9P2J8 865 aaPredicted RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 RAMP2O60895 175 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 CNOT3O75175 753 aaKnown RBP18.54■□□□□ 0.56
SNX27-202ENST00000368841 VAPBO95292 243 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 RAG1P15918 1043 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 MUTP22033 750 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 PSMA3P25788 255 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 CDC25CP30307 473 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 ELK3P41970 407 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 ST13P50502 369 aaKnown RBP18.54■□□□□ 0.56
SNX27-202ENST00000368841 TOB1P50616 345 aaPredicted RBP18.54■□□□□ 0.56
SNX27-202ENST00000368841 RNF145Q96MT1 663 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 PNMA5Q96PV4 448 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 CLTCQ00610 1675 aaKnown RBP18.54■□□□□ 0.56
SNX27-202ENST00000368841 CNPP09543 421 aaKnown RBP18.54■□□□□ 0.56
SNX27-202ENST00000368841 FBXO39Q8N4B4 442 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 TOR4AQ9NXH8 423 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 PCDHB5Q9Y5E4 795 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 TRIM24O15164 1050 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 OR6A2O95222 327 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 NFKB1P19838 968 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 NPY2RP49146 381 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 CDK20Q8IZL9 346 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 SIKE1Q9BRV8 207 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 SLC4A5Q9BY07 1137 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 TUT1Q9H6E5 874 aaKnown RBP18.54■□□□□ 0.56
SNX27-202ENST00000368841 SNTNA6NMZ2 147 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 STX4Q12846 297 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 IL27RAQ6UWB1 636 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 CASP12Q6UXS9 341 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 EFCAB3Q8N7B9 438 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 TKTL2Q9H0I9 626 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 A1CFQ9NQ94 594 aaKnown RBP18.54■□□□□ 0.56
SNX27-202ENST00000368841 DSEQ9UL01 958 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 BANF1O75531 89 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 ADCYAP1R1P41586 468 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 ITIH5Q86UX2 942 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 CCDC126Q96EE4 140 aa18.54■□□□□ 0.56
SNX27-202ENST00000368841 PURBQ96QR8 312 aaKnown RBP18.54■□□□□ 0.56
SNX27-202ENST00000368841 UBOX5O94941 541 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 TPBGLP0DKB5 382 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 XRCC4Q13426 336 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 SETMARQ53H47 684 aaPredicted RBP18.53■□□□□ 0.56
SNX27-202ENST00000368841 SPATA6LQ8N4H0 392 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 DDX18Q9NVP1 670 aaKnown RBP18.53■□□□□ 0.56
SNX27-202ENST00000368841 C1orf232A0A0U1RR37 186 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 H3BRB1 525 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 PIK3CDO00329 1044 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 ADORA2AP29274 412 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 SRSF11Q05519 484 aaKnown RBP18.53■□□□□ 0.56
SNX27-202ENST00000368841 PPP1R26Q5T8A7 1209 aaPredicted RBP18.53■□□□□ 0.56
SNX27-202ENST00000368841 MILR1Q7Z6M3 343 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 TXNRD3Q86VQ6 643 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 GLIS2Q9BZE0 524 aaPredicted RBP18.53■□□□□ 0.56
SNX27-202ENST00000368841 ZNF37AP17032 561 aaPredicted RBP18.53■□□□□ 0.56
SNX27-202ENST00000368841 TSC22D1Q15714 1073 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 PDZK1Q5T2W1 519 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 ZCCHC8Q6NZY4 707 aaKnown RBP18.53■□□□□ 0.56
SNX27-202ENST00000368841 KDM7AQ6ZMT4 941 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 GDPD5Q8WTR4 605 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 A2ML1A8K2U0 1454 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms