RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 WDCPQ9H6R7 721 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 STIM2Q9P246 746 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 SLC12A6Q9UHW9 1150 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 PCDHGA2Q9Y5H1 932 aa23.23■■□□□ 1.31
ECHDC1-203ENST00000368291 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.23■■□□□ 1.311e-7■■■■□ 23.8
ECHDC1-203ENST00000368291 CKAP5Q14008 2032 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 SIGLEC16A6NMB1 481 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 PAGE1O75459 146 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 F9P00740 461 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 PLEKP08567 350 aaPredicted RBP23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 KRT3P12035 628 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 GZMAP12544 262 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 RRM1P23921 792 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 PXNP49023 591 aaPredicted RBP23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 FNTBP49356 437 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 NRLP54845 237 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 CRY1Q16526 586 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 C15orf59Q2T9L4 293 aaPredicted RBP23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 BRMS1LQ5PSV4 323 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 PPP1R15BQ5SWA1 713 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 SH3PXD2AQ5TCZ1 1133 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 SPECC1LQ69YQ0 1117 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 HEATR6Q6AI08 1181 aaKnown RBP23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 ANKS1BQ7Z6G8 1248 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 GAS2L3Q86XJ1 694 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 VSTM4Q8IW00 320 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 VCPIP1Q96JH7 1222 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 SELENOOQ9BVL4 669 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 TKTL2Q9H0I9 626 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 RBSNQ9H1K0 784 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 TMPRSS4Q9NRS4 437 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 HS3ST4Q9Y661 456 aa23.22■■□□□ 1.31
ECHDC1-203ENST00000368291 PDGFRAP16234 1089 aa23.21■■□□□ 1.31
ECHDC1-203ENST00000368291 PTPN9P43378 593 aa23.21■■□□□ 1.31
ECHDC1-203ENST00000368291 ATP11AP98196 1134 aa23.21■■□□□ 1.31
ECHDC1-203ENST00000368291 FBXL22Q6P050 247 aa23.21■■□□□ 1.31
ECHDC1-203ENST00000368291 WDR59Q6PJI9 974 aa23.21■■□□□ 1.31
ECHDC1-203ENST00000368291 SARM1Q6SZW1 724 aa23.21■■□□□ 1.31
ECHDC1-203ENST00000368291 CAMKK1Q8N5S9 505 aa23.21■■□□□ 1.31
ECHDC1-203ENST00000368291 ABCB8Q9NUT2 735 aa23.21■■□□□ 1.31
ECHDC1-203ENST00000368291 SPAG17Q6Q759 2223 aa23.2■■□□□ 1.31
ECHDC1-203ENST00000368291 F5H5T6 163 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 SERPING1P05155 500 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 HNRNPH3P31942 346 aaKnown RBP23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 CD70P32970 193 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 RDXP35241 583 aaKnown RBP23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 GGCXP38435 758 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 RPL7AP62424 266 aaKnown RBP23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 MTA1Q13330 715 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 TDRD12Q587J7 1177 aaKnown RBP23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 EOGTQ5NDL2 527 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 ARTNQ5T4W7 220 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 ZC3H14Q6PJT7 736 aaKnown RBP23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 C14orf80Q86SX3 495 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 FIBINQ8TAL6 211 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 CENPIQ92674 756 aaPredicted RBP23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 ELOVL2Q9NXB9 296 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 GGA2Q9UJY4 613 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 BZW2Q9Y6E2 419 aaKnown RBP23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 USP34Q70CQ2 3546 aa23.2■■□□□ 1.3
ECHDC1-203ENST00000368291 RTN2O75298 545 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 FTLP02792 175 aaPredicted RBP23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 PABPC1P11940 636 aaKnown RBP23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 NTSR1P30989 418 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 SDC4P31431 198 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 WASP42768 502 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 IRAK1P51617 712 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 AUHQ13825 339 aaKnown RBP23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 CDO1Q16878 200 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 FSCBQ5H9T9 825 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 PPP1R2P3Q6NXS1 205 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 DNAJC24Q6P3W2 148 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 SND1Q7KZF4 910 aaKnown RBP eCLIP23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 ADIPOR2Q86V24 386 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 WDR5BQ86VZ2 330 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 LONP2Q86WA8 852 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 CIR1Q86X95 450 aaPredicted RBP23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 FAM131BQ86XD5 332 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 MFN1Q8IWA4 741 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 ZNF683Q8IZ20 524 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 ATRIPQ8WXE1 791 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 IGSF8Q969P0 613 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 ISCUQ9H1K1 167 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 CD248Q9HCU0 757 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 TMEM51Q9NW97 253 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 ARHGAP20Q9P2F6 1191 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 ADAMTS1Q9UHI8 967 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 SNX10Q9Y5X0 201 aa23.19■■□□□ 1.3
ECHDC1-203ENST00000368291 CCDC163A0A0D9SF12 145 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 TYW5A2RUC4 315 aaKnown RBP23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 ATMINO43313 823 aaPredicted RBP23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 LUC7L3O95232 432 aaKnown RBP23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 HDAC4P56524 1084 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 LMAN2Q12907 356 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 ARID5BQ14865 1188 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 C5orf22Q49AR2 442 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 PLEKHA7Q6IQ23 1121 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 CHST9Q7L1S5 443 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 STRADAQ7RTN6 431 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms