RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CBX4O00257 560 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 GP5P40197 560 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 SETMARQ53H47 684 aaPredicted RBP9.89□□□□□ -0.83
CUX1-203ENST00000360264 RBM12Q9NTZ6 932 aaKnown RBP9.89□□□□□ -0.83
CUX1-203ENST00000360264 A0A087X0T9 212 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 URADA6NGE7 173 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 EN1Q05925 392 aaPredicted RBP9.89□□□□□ -0.83
CUX1-203ENST00000360264 CES5AQ6NT32 575 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 CAMK1DQ8IU85 385 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 GBA2Q9HCG7 927 aaPredicted RBP9.89□□□□□ -0.83
CUX1-203ENST00000360264 TKTL1P51854 596 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 CBWD3Q5JTY5 395 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 CBWD5Q5RIA9 395 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 DLGAP2Q9P1A6 1054 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 CCNT2O60583 730 aaKnown RBP9.89□□□□□ -0.83
CUX1-203ENST00000360264 PPP4CP60510 307 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 KDM7AQ6ZMT4 941 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 NECAB2Q7Z6G3 386 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 TRHDEQ9UKU6 1024 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 SLC2A4P14672 509 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 PIK3R1P27986 724 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 BNC1Q01954 994 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 CCDC157Q569K6 752 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 COLGALT1Q8NBJ5 622 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 FAM111AQ96PZ2 611 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 ZNF112Q9UJU3 913 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 MRTO4Q9UKD2 239 aaKnown RBP9.89□□□□□ -0.83
CUX1-203ENST00000360264 SCNN1BP51168 640 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 ACOX1Q15067 660 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 CCDC149Q6ZUS6 474 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 MIER2Q8N344 545 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 FKBP6O75344 327 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 MED24O75448 989 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 SLC44A4Q53GD3 710 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 ELOVL4Q9GZR5 314 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 PLAGL2Q9UPG8 496 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 DNALI1O14645 258 aaPredicted RBP9.88□□□□□ -0.83
CUX1-203ENST00000360264 TRDMT1O14717 391 aaKnown RBP9.88□□□□□ -0.83
CUX1-203ENST00000360264 BCL10O95999 233 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 POMGNT2Q8NAT1 580 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 MSRAQ9UJ68 235 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ALDH2P05091 517 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 MPP3Q13368 585 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 TRIM25Q14258 630 aaKnown RBP9.88□□□□□ -0.83
CUX1-203ENST00000360264 TRMT11Q7Z4G4 463 aaKnown RBP9.88□□□□□ -0.83
CUX1-203ENST00000360264 FAM220AQ7Z4H9 259 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 SLC44A2Q8IWA5 706 aaPredicted RBP9.88□□□□□ -0.83
CUX1-203ENST00000360264 LRRC71Q8N4P6 559 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 TMEM216Q9P0N5 145 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 KDM6BO15054 1643 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 CHURC1-FNTBB4DL54 471 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 CAPN1P07384 714 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 SLC29A2Q14542 456 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 FBXO36Q8NEA4 188 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ZIM3Q96PE6 472 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 RUSC1Q9BVN2 902 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 HEY2Q9UBP5 337 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ACSL4O60488 711 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 CAMTA2O94983 1202 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ATP6V1B2P21281 511 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 CYP2C18P33260 490 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 TBX4P57082 545 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 RXFP1Q9HBX9 757 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 SYNPO2Q9UMS6 1093 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 DUSP12Q9UNI6 340 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 AP4E1Q9UPM8 1137 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 PDE2AO00408 941 aaPredicted RBP9.88□□□□□ -0.83
CUX1-203ENST00000360264 ASNA1O43681 348 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 PON1P27169 355 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 CAP2P40123 477 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 THOP1P52888 689 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 MSLNQ13421 630 aaPredicted RBP9.88□□□□□ -0.83
CUX1-203ENST00000360264 KCNMB4Q86W47 210 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ADHFE1Q8IWW8 467 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 TRPC4APQ8TEL6 797 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 MYH1P12882 1939 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 MYH4Q9Y623 1939 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 OR6A2O95222 327 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 GYPCP04921 128 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 MYBL2P10244 700 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ERMARDQ5T6L9 678 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 MARC1Q5VT66 337 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 PACS1Q6VY07 963 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 GPSM1Q86YR5 675 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 PAFAH2Q99487 392 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 TMEM39BQ9GZU3 492 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 SPATA2Q9UM82 520 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 ZNF185O15231 689 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 GRIK4Q16099 956 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 DGUOKQ16854 277 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 SPANXN2Q5MJ10 180 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 USP45Q70EL2 814 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 DPY30Q9C005 99 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 CACNA1EQ15878 2313 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 FAM25AB3EWG3 89 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 FAM25CB3EWG5 89 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 FAM25GB3EWG6 89 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 FASTKQ14296 549 aaKnown RBP9.88□□□□□ -0.83
CUX1-203ENST00000360264 LAYNQ6UX15 382 aa9.88□□□□□ -0.83
CUX1-203ENST00000360264 C6orf62Q9GZU0 229 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms