RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 SGO1Q5FBB7 561 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 OLFML1Q6UWY5 402 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 CCDC149Q6ZUS6 474 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 PLEKHM3Q6ZWE6 761 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 METTL3Q86U44 580 aaKnown RBP12.5□□□□□ -0.41
DNMT1-202ENST00000359526 ASB2Q96Q27 587 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 COMMD8Q9NX08 183 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 RPL26L1Q9UNX3 145 aaKnown RBP12.5□□□□□ -0.41
DNMT1-202ENST00000359526 CAB39Q9Y376 341 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-202ENST00000359526 SYNDIG1LA6NDD5 238 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 ACKR2O00590 384 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 HOXB8P17481 243 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-202ENST00000359526 KRT20P35900 424 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 RHBDL3P58872 404 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 CNTN1Q12860 1018 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 C16orf72Q14CZ0 275 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 PKN2Q16513 984 aaKnown RBP12.5□□□□□ -0.41
DNMT1-202ENST00000359526 CELF3Q5SZQ8 465 aaKnown RBP12.5□□□□□ -0.41
DNMT1-202ENST00000359526 SCARA3Q6AZY7 606 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 CCDC81Q6ZN84 652 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 GDPD5Q8WTR4 605 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 DLG3Q92796 817 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 BBS2Q9BXC9 721 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 GLIS2Q9BZE0 524 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-202ENST00000359526 DDX18Q9NVP1 670 aaKnown RBP12.5□□□□□ -0.41
DNMT1-202ENST00000359526 GPATCH2LQ9NWQ4 482 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 FAM198AQ9UFP1 575 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 MSRAQ9UJ68 235 aa12.5□□□□□ -0.41
DNMT1-202ENST00000359526 GLP2RO95838 553 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 CTSHP09668 335 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 RRM2P31350 389 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 FBXW4P57775 412 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 PURAQ00577 322 aaKnown RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 MAD2L1Q13257 205 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 ITGB3BPQ13352 177 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 FUT11Q495W5 492 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 LRRC38Q5VT99 294 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 NANOGNBQ7Z5D8 188 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 LUZP2Q86TE4 346 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 HEATR4Q86WZ0 1026 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 ETNPPLQ8TBG4 499 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 WDR60Q8WVS4 1066 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 P2RX7Q99572 595 aaKnown RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 APOC4-APOC2K7ER74 178 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 RNF103O00237 685 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 APOC2P02655 101 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 CD151P48509 253 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 TUFMP49411 452 aaKnown RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 IKBKEQ14164 716 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 SEZ6Q53EL9 994 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 LPCAT2Q7L5N7 544 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 ZFYVE19Q96K21 471 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 RAD18Q9NS91 495 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 CROTQ9UKG9 612 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 NR5A2O00482 541 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 CYB561D2O14569 222 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 HMGB3O15347 200 aaKnown RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 CSPG5O95196 566 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 HMGCRP04035 888 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 DDX53Q86TM3 631 aaKnown RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 RPRD1AQ96P16 312 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 YME1L1Q96TA2 773 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.49□□□□□ -0.413e-6■■□□□ 14.4
DNMT1-202ENST00000359526 KRCC1Q9NPI7 259 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 INTS13Q9NVM9 706 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 CYP39A1Q9NYL5 469 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 COPG2Q9UBF2 871 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 V9GYQ6 96 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 RNASEH1O60930 286 aaKnown RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 RXRGP48443 463 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 BMPR2Q13873 1038 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 SPATA17Q96L03 361 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 KCTD14Q9BQ13 255 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-202ENST00000359526 TMEM79Q9BSE2 394 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 UBAP1Q9NZ09 502 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 UBIAD1Q9Y5Z9 338 aa12.49□□□□□ -0.41
DNMT1-202ENST00000359526 F8W810 466 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 LYPLA2O95372 231 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 HNRNPH3P31942 346 aaKnown RBP12.48□□□□□ -0.41
DNMT1-202ENST00000359526 CYP2C18P33260 490 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 SOAT1P35610 550 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 CYP51A1Q16850 503 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 AGKQ53H12 422 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 TBCELQ5QJ74 424 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 MAP4K3Q8IVH8 894 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 HTR3CQ8WXA8 447 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 VAT1Q99536 393 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 BDH2Q9BUT1 245 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 UBXN6Q9BZV1 441 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 PAIP1Q9H074 479 aaKnown RBP12.48□□□□□ -0.41
DNMT1-202ENST00000359526 STN1Q9H668 368 aaKnown RBP12.48□□□□□ -0.41
DNMT1-202ENST00000359526 SLC25A13Q9UJS0 675 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 CORO1CQ9ULV4 474 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-202ENST00000359526 CASZ1Q86V15 1759 aa12.48□□□□□ -0.41
DNMT1-202ENST00000359526 KRT87PA6NCN2 255 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms