RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 LSM8O95777 96 aaKnown RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 DNAJB2P25686 324 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 HIRAP54198 1017 aaPredicted RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 RAB2AP61019 212 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 PIK3C3Q8NEB9 887 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 SPPL2AQ8TCT8 520 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 AENQ8WTP8 325 aaKnown RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 TEKT5Q96M29 485 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 RNF145Q96MT1 663 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 TRPM5Q9NZQ8 1165 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 LNPEPQ9UIQ6 1025 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 HPGDP15428 266 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 GSTM5P46439 218 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 GMFBP60983 142 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 ABATP80404 500 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 CUL2Q13617 745 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 SMTNL2Q2TAL5 461 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 SPOCD1Q6ZMY3 1216 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 TMC3Q7Z5M5 1100 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 DEPDC4Q8N2C3 294 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 GPRASP2Q96D09 838 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 HAVCR1Q96D42 359 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 MXRA8Q9BRK3 442 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 OSBPL11Q9BXB4 747 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 RACGAP1Q9H0H5 632 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 NEK6Q9HC98 313 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 CHST12Q9NRB3 414 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 CMTM6Q9NX76 183 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 TMEM216Q9P0N5 145 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 DSEQ9UL01 958 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 WBP11Q9Y2W2 641 aaKnown RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 ACTL7BQ9Y614 415 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 ERVK-10P10266 1014 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 NR6A1Q15406 480 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 SPANXN3Q5MJ09 141 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 HPDLQ96IR7 371 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 CPNE1Q99829 537 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 GDF3Q9NR23 364 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 LIMD1Q9UGP4 676 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 PRR12Q9ULL5 1215 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 PNMA8BQ9ULN7 279 aaPredicted RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 PADI4Q9UM07 663 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 NPTXRO95502 500 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 VIL1P09327 827 aaKnown RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 ITGALP20701 1170 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 GP5P40197 560 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 GCLCP48506 637 aaPredicted RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 ELAVL2Q12926 359 aaKnown RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 VN1R5Q7Z5H4 357 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 C11orf96Q7Z7L8 435 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 RNASE11Q8TAA1 199 aaKnown RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 SLC20A1Q8WUM9 679 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 NSUN4Q96CB9 384 aaKnown RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 REEP1Q9H902 201 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 FAM49BQ9NUQ9 324 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 ABI2Q9NYB9 513 aaPredicted RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 PROSCO94903 275 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 TCF4P15884 667 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 MMP14P50281 582 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 CCNG1P51959 295 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 SLC15A2Q16348 729 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 GLRA4Q5JXX5 417 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 N4BP2L1Q5TBK1 243 aaPredicted RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 EIF3MQ7L2H7 374 aaKnown RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 CRB1P82279 1406 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 TNS3Q68CZ2 1445 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 KPNA6O60684 536 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 MBL2P11226 248 aaPredicted RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 ACADMP11310 421 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 KLK7P49862 253 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 SRP54P61011 504 aaKnown RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 ZNF844Q08AG5 666 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 TMEM62Q0P6H9 643 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 ZNF484Q5JVG2 852 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 EPHA10Q5JZY3 1008 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 ATG14Q6ZNE5 492 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 FBXW8Q8N3Y1 598 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 ZNF276Q8N554 614 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 ENGASEQ8NFI3 743 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 ZNF75CPQ92670 426 aaPredicted RBP13.12□□□□□ -0.31
SMC4-202ENST00000357388 PRKD2Q9BZL6 878 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 CLPBQ9H078 707 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 NMRAL1Q9HBL8 299 aa13.12□□□□□ -0.31
SMC4-202ENST00000357388 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 RPA1P27694 616 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 THPOP40225 353 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 NEK3P51956 506 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 HERVK_113P62684 666 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 TYSND1Q2T9J0 566 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 PRR23BQ6ZRT6 265 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 DHDDSQ86SQ9 333 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 PDPRQ8NCN5 879 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 AGBL3Q8NEM8 1001 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 CDRT15Q96T59 188 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 SPATA31A6Q5VVP1 1343 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 UNC5CO95185 931 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 PIK3CGP48736 1102 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms