RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PRKG2Q13237 762 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 NAA30Q147X3 362 aaPredicted RBP6.71□□□□□ -1.33
VPS13B-202ENST00000357162 KIF22Q14807 665 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 DGKDQ16760 1214 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 PHKG1Q16816 387 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 CASP12Q6UXS9 341 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 ACTL9Q8TC94 416 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 URGCPQ8TCY9 931 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 NMD3Q96D46 503 aaKnown RBP6.71□□□□□ -1.33
VPS13B-202ENST00000357162 GPN3Q9UHW5 284 aaPredicted RBP6.71□□□□□ -1.33
VPS13B-202ENST00000357162 CNTNAP5Q8WYK1 1306 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 UGT2B11O75310 529 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 ALDH1A3P47895 512 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 PEX3P56589 373 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 QPRTQ15274 297 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 THRSPQ92748 146 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 PPP1R36Q96LQ0 422 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 MAGEL2Q9UJ55 1249 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 DNPEPQ9ULA0 475 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 CHST10O43529 356 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 PDGFRAP16234 1089 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 BMT2Q1RMZ1 405 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 C10orf62Q5T681 223 aaPredicted RBP6.71□□□□□ -1.33
VPS13B-202ENST00000357162 STRIP1Q5VSL9 837 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 RBM12BQ8IXT5 1001 aaKnown RBP6.71□□□□□ -1.33
VPS13B-202ENST00000357162 FAM71DQ8N9W8 422 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 GOLM1Q8NBJ4 401 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 SPATA20Q8TB22 786 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF669Q96BR6 464 aaPredicted RBP6.71□□□□□ -1.33
VPS13B-202ENST00000357162 EFHD2Q96C19 240 aaPredicted RBP6.71□□□□□ -1.33
VPS13B-202ENST00000357162 B3GALT6Q96L58 329 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 C12orf66Q96MD2 445 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 TUBA1CQ9BQE3 449 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 SMARCAD1Q9H4L7 1026 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 HMGXB4Q9UGU5 601 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 ANAPC2Q9UJX6 822 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 FRMPD2Q68DX3 1309 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 C19orf81C9J6K1 198 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 ZSCAN9O15535 394 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 ENTPD3O75355 529 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 VAV1P15498 845 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 GTF2IP78347 998 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 ELP6Q0PNE2 266 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 TROAPQ12815 778 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 IL18R1Q13478 541 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 ZCCHC8Q6NZY4 707 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 NUP93Q8N1F7 819 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 DRAXINQ8NBI3 349 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 MOSPD2Q8NHP6 518 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 REEP2Q9BRK0 252 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PDGFCQ9NRA1 345 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 MTMR4Q9NYA4 1195 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 ARHGEF28Q8N1W1 1705 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 GRIN2DO15399 1336 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 TTC28Q96AY4 2481 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 MYBL2P10244 700 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 NPY2RP49146 381 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 AP1S2P56377 157 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PDK3Q15120 406 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 HIST2H2ACQ16777 129 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 HIST2H2AA3Q6FI13 130 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 EIF5AL1Q6IS14 154 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 C16orf86Q6ZW13 317 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 SULF1Q8IWU6 871 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 CENPIQ92674 756 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 APOL2Q9BQE5 337 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 MYLK2Q9H1R3 596 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 DAPK2Q9UIK4 370 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 CHD1O14646 1710 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 GPIP06744 558 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 DRD4P21917 467 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PTPROQ16827 1216 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PLA2G4FQ68DD2 849 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 OLFML1Q6UWY5 402 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 CATSPER4Q7RTX7 472 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 RAB43Q86YS6 212 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 OR6B3Q8NGW1 331 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 MCEEQ96PE7 176 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PDLIM1O00151 329 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 CYP2D6P10635 497 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 ITGB6P18564 788 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 ERICH5Q6P6B1 374 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 FGD2Q7Z6J4 655 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 CENPLQ8N0S6 344 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 OR56A4Q8NGH8 313 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 NKX2-3Q8TAU0 364 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 RBM4BQ9BQ04 359 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 RBM4Q9BWF3 364 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 EMILIN2Q9BXX0 1053 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 KCNN2Q9H2S1 579 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 KIF28PB7ZC32 967 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 CD151P48509 253 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 OAZ1P54368 228 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 SESN2P58004 480 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 ARFGEF3Q5TH69 2177 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 TSHZ1Q6ZSZ6 1077 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PEG10Q86TG7 708 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 RDH12Q96NR8 316 aa6.71□□□□□ -1.34
VPS13B-202ENST00000357162 PAIP1Q9H074 479 aaKnown RBP6.71□□□□□ -1.34
VPS13B-202ENST00000357162 NOL11Q9H8H0 719 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms