RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 TMPRSS4Q9NRS4 437 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 VANGL2Q9ULK5 521 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 GUCA1BQ9UMX6 200 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 ALG6Q9Y672 507 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 KIF26AQ9ULI4 1882 aaPredicted RBP16.06■□□□□ 0.16
TRIM13-201ENST00000356017 MYO10Q9HD67 2058 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.05■□□□□ 0.16
TRIM13-201ENST00000356017 E9PAM4 449 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 SPECC1L-ADORA2AF8WAN1 911 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 MAN2B1O00754 1011 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 TRDMT1O14717 391 aaKnown RBP16.05■□□□□ 0.16
TRIM13-201ENST00000356017 SPOPO43791 374 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 CACNG3O60359 315 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 COMTP21964 271 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 L1CAMP32004 1257 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 CTHP32929 405 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 HTR7P34969 479 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 SLC25A11Q02978 314 aaKnown RBP16.05■□□□□ 0.16
TRIM13-201ENST00000356017 MLF2Q15773 248 aaPredicted RBP16.05■□□□□ 0.16
TRIM13-201ENST00000356017 C5orf22Q49AR2 442 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 LRRC38Q5VT99 294 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 DAB2IPQ5VWQ8 1189 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 POLNQ7Z5Q5 900 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 UBE2Q2Q8WVN8 375 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 PEBP4Q96S96 227 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 EPAS1Q99814 870 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 SNRNP25Q9BV90 132 aaKnown RBP16.05■□□□□ 0.16
TRIM13-201ENST00000356017 SLC2A11Q9BYW1 496 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 RETREG1Q9H6L5 497 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 ZWILCHQ9H900 591 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 LZTFL1Q9NQ48 299 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 ARHGEF3Q9NR81 526 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 PPARGC1AQ9UBK2 798 aaKnown RBP16.05■□□□□ 0.16
TRIM13-201ENST00000356017 IGLV3-10A0A075B6K4 115 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 TBL1XO60907 577 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 SRGAP2O75044 1071 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 IL1R2P27930 398 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 SIGLEC14Q08ET2 396 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 CYP4V2Q6ZWL3 525 aaPredicted RBP16.05■□□□□ 0.16
TRIM13-201ENST00000356017 RHOT1Q8IXI2 618 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 BHMTQ93088 406 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 PRICKLE1Q96MT3 831 aaPredicted RBP16.05■□□□□ 0.16
TRIM13-201ENST00000356017 DHX35Q9H5Z1 703 aaKnown RBP16.05■□□□□ 0.16
TRIM13-201ENST00000356017 PLK2Q9NYY3 685 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 TRIM10Q9UDY6 481 aa16.05■□□□□ 0.16
TRIM13-201ENST00000356017 A0A0U1RQJ8 604 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 A0A1B0GVM2 712 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 TCAF2A6NFQ2 919 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 DRGXA6NNA5 263 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 CLDN11O75508 207 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 RARAP10276 462 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 TCF4P15884 667 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 HOXD9P28356 352 aaPredicted RBP16.04■□□□□ 0.16
TRIM13-201ENST00000356017 RPS24P62847 133 aaKnown RBP16.04■□□□□ 0.16
TRIM13-201ENST00000356017 DPYSL2Q16555 572 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 KCNT1Q5JUK3 1230 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 RNF43Q68DV7 783 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 ZNF852Q6ZMS4 543 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 TPRG1Q6ZUI0 275 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 NUDT18Q6ZVK8 323 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 C14orf80Q86SX3 495 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 SUGP1Q8IWZ8 645 aaKnown RBP16.04■□□□□ 0.16
TRIM13-201ENST00000356017 ETFBKMTQ8IXQ9 262 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 ZNF683Q8IZ20 524 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 CFAP52Q8N1V2 620 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 ATRIPQ8WXE1 791 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 ZYG11BQ9C0D3 744 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 DEC1Q9P2X7 70 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 CA14Q9ULX7 337 aa16.04■□□□□ 0.16
TRIM13-201ENST00000356017 MRPS17Q9Y2R5 130 aaKnown RBP16.04■□□□□ 0.16
TRIM13-201ENST00000356017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRIM13-201ENST00000356017 CREB3O43889 395 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 LRIG2O94898 1065 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 MOCS3O95396 460 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 GGCXP38435 758 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 SOX9P48436 509 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 CDH4P55283 916 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 STARD6P59095 220 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 SEMA3BQ13214 749 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 SMTNL2Q2TAL5 461 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 GAB4Q2WGN9 574 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 MANEALQ5VSG8 457 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 CHST9Q7L1S5 443 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 MFN1Q8IWA4 741 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 MAP7D3Q8IWC1 876 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 SIX5Q8N196 739 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 PYROXD2Q8N2H3 581 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 NAT16Q8N8M0 369 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 LRRC57Q8N9N7 239 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 HSPH1Q92598 858 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 CD101Q93033 1021 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 IGSF8Q969P0 613 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 TBC1D31Q96DN5 1066 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 P2RY13Q9BPV8 354 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRIM13-201ENST00000356017 DONSONQ9NYP3 566 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 STIM2Q9P246 746 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 FBXO10Q9UK96 956 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 SNX10Q9Y5X0 201 aa16.03■□□□□ 0.16
TRIM13-201ENST00000356017 VCANP13611 3396 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms