RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 H3BNX3 289 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 PSMD12O00232 456 aaPredicted RBP12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 GAS2O43903 313 aaKnown RBP12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 CYBBP04839 570 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 NPY2RP49146 381 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 RPS6KA3P51812 740 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 CSE1LP55060 971 aaKnown RBP12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 SPP2Q13103 211 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 RNF220Q5VTB9 566 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 DUPD1Q68J44 220 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 FASTKD5Q7L8L6 764 aaKnown RBP12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 IQCKQ8N0W5 287 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 KCNH7Q9NS40 1196 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 DNPEPQ9ULA0 475 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 SQORQ9Y6N5 450 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 SALL3Q9BXA9 1300 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 DPPA5A6NC42 116 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 ECE2O60344 883 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 RECQL5O94762 991 aaPredicted RBP12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 ITGB3P05106 788 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 NR3C2P08235 984 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 TNS3Q68CZ2 1445 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 CHSY1Q86X52 802 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 ADPRHL2Q9NX46 363 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 C3orf18Q9UK00 162 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 QRICH2Q9H0J4 1663 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 TSPAN19P0C672 248 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 NR2C2P49116 596 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 DPYSQ14117 519 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 QPCTQ16769 361 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 CACTIN-AS1Q8N1I8 211 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 MMP19Q99542 508 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 SPAG4Q9NPE6 437 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 DDIT4Q9NX09 232 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 PNMA8BQ9ULN7 279 aaPredicted RBP12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 WDR27A2RRH5 827 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 MGAT4DA6NG13 374 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 UBE2Q2LH0YL09 131 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 OGTO15294 1046 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 GLP2RO95838 553 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 GSTM1P09488 218 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 MAPTP10636 758 aaKnown RBP12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CYP2F1P24903 491 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 SLC26A3P40879 764 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CDH17Q12864 832 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 SQLEQ14534 574 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZSWIM7Q19AV6 140 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 SH3BP5LQ7L8J4 393 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 FAM13CQ8NE31 585 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 TAS1R2Q8TE23 839 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 NAT14Q8WUY8 206 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZHX1-C8orf76Q96EF9 292 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 TCF12Q99081 682 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CINPQ9BW66 212 aaPredicted RBP12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 EDF1O60869 148 aaKnown RBP12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 STX11O75558 287 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 DNAJB2P25686 324 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 ETFBP38117 255 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CAPZA2P47755 286 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 RAB25P57735 213 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 TTC30AQ86WT1 665 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 DNAAF5Q86Y56 855 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 SPPL2AQ8TCT8 520 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 EPB41L1Q9H4G0 881 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 C8orf4Q9NR00 106 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CHST7Q9NS84 486 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 DAGLAQ9Y4D2 1042 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 KLHL18O94889 574 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 MT-CO1P00395 513 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 SLC2A4P14672 509 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 FLT3P36888 993 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 BNIP2Q12982 314 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 VPS72Q15906 364 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CDC73Q6P1J9 531 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 NECAB2Q7Z6G3 386 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 FNDC5Q8NAU1 212 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 ADCY4Q8NFM4 1077 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 PRKD2Q9BZL6 878 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 GPATCH2LQ9NWQ4 482 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CLCA2Q9UQC9 943 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 BIRC5O15392 142 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 PIGNO95427 931 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CCDC166P0CW27 439 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CDC16Q13042 620 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 C17orf50Q8WW18 174 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 PHF21BQ96EK2 531 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 TEKT5Q96M29 485 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 PLA2G6O60733 806 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 FESP07332 822 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 GRIA3P42263 894 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 CCNG1P51959 295 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 RAB15P59190 212 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 TUBA4AP68366 448 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 BAATQ14032 418 aaPredicted RBP12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 SCARA3Q6AZY7 606 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZNF544Q6NX49 715 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 TCAIMQ8N3R3 496 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms