RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 HACD1B0YJ81 288 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 ARHGEF9O43307 516 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 RENBPP51606 427 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 CDC16Q13042 620 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 FAM171A1Q5VUB5 890 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 RIPOR1Q6ZS17 1223 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 PRCCQ92733 491 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-201ENST00000351677 RMND5AQ9H871 391 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 RRN3Q9NYV6 651 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 ATP11BQ9Y2G3 1177 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 LZTS3O60299 673 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-201ENST00000351677 NT5DC4Q86YG4 428 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 IRF2BP1Q8IU81 584 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 RIN3Q8TB24 985 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 SHC3Q92529 594 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 H2AFY2Q9P0M6 372 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-201ENST00000351677 URODP06132 367 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 CAPSQ13938 189 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 PACS2Q86VP3 889 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 STX19Q8N4C7 294 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 EIF1ADQ8N9N8 165 aaKnown RBP16.37■□□□□ 0.21
PTPN11-201ENST00000351677 SMPD4Q9NXE4 827 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 SAC3D1A6NKF1 404 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 TPP1O14773 563 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 DCXO43602 365 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 PBX1P40424 430 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 RPL7AP62424 266 aaKnown RBP16.37■□□□□ 0.21
PTPN11-201ENST00000351677 HPCAP84074 193 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 CDK16Q00536 496 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 OASLQ15646 514 aaKnown RBP16.37■□□□□ 0.21
PTPN11-201ENST00000351677 WASHC2DQ5SRD0 308 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 ZNF662Q6ZS27 426 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 ZBTB49Q6ZSB9 765 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 GPR141Q7Z602 305 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 SLC9A9Q8IVB4 645 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 JADE3Q92613 823 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 AAASQ9NRG9 546 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 NFASCO94856 1347 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 A0A0B4J269 797 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 ZNF682O95780 498 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 ALADP13716 330 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 PSMB4P28070 264 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 SEPT8Q92599 483 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 PPP2R3CQ969Q6 453 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 GAD1Q99259 594 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 FBXO44Q9H4M3 255 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 IMPAD1Q9NX62 359 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 CCNT2O60583 730 aaKnown RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 LTFP02788 710 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 ALOX15P16050 662 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 BFSP2Q13515 415 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 SLC39A12Q504Y0 691 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 KCTD14Q9BQ13 255 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 CAPN10Q9HC96 672 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 XPNPEP3Q9NQH7 507 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 PHGDHO43175 533 aaKnown RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 HOXA2O43364 376 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 KPNA6O60684 536 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 PPP1R11O60927 126 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 GJB1P08034 283 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 AXLP30530 894 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 CCNG1P51959 295 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 MRPS15P82914 257 aaKnown RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 ALLCQ8N6M5 410 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 MRIQ9BWK5 157 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 TRDMT1O14717 391 aaKnown RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 TOMM70O94826 608 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 FGRP09769 529 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 RPL22P35268 128 aaKnown RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 CHI3L1P36222 383 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 HALP42357 657 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 AMPD2Q01433 879 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 SLC45A4Q5BKX6 768 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 LRRC8DQ7L1W4 858 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 RIOX2Q8IUF8 465 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 HERC6Q8IVU3 1022 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 CKAP2Q8WWK9 683 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 MID1IP1Q9NPA3 183 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 GIMAP4Q9NUV9 329 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 TBKBP1A7MCY6 615 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 SLC2A4P14672 509 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 TMEM132BQ14DG7 1078 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 ACBD5Q5T8D3 534 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 SNX30Q5VWJ9 437 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 KIAA2013Q8IYS2 634 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 B3GALNT2Q8NCR0 500 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 SENP8Q96LD8 212 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 ACO2Q99798 780 aaKnown RBP16.36■□□□□ 0.21
PTPN11-201ENST00000351677 ENTPD7Q9NQZ7 604 aa16.36■□□□□ 0.21
PTPN11-201ENST00000351677 TRUB2O95900 331 aaKnown RBP16.35■□□□□ 0.21
PTPN11-201ENST00000351677 PCNAP12004 261 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 CRABP2P29373 138 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 HNRNPH3P31942 346 aaKnown RBP16.35■□□□□ 0.21
PTPN11-201ENST00000351677 EPHB3P54753 998 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 TBCELQ5QJ74 424 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 WSCD1Q658N2 575 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 GPC2Q8N158 579 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 OR52K1Q8NGK4 314 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 DTNBP1Q96EV8 351 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 PDGFDQ9GZP0 370 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms