RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 NPC1O15118 1278 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 C7P10643 843 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 ACADMP11310 421 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 GNSP15586 552 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 CTSOP43234 321 aaPredicted RBP11.39□□□□□ -0.59
UBE2A-201ENST00000346330 ZNF132P52740 706 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 LRRC63Q05C16 580 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 SLC14A1Q13336 389 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 KIF19Q2TAC6 998 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 HLA-BQ31612 363 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 SYPL2Q5VXT5 272 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 KLHL10Q6JEL2 608 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 DENND1BQ6P3S1 775 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 CFAP52Q8N1V2 620 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 SCML4Q8N228 414 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 PPM1KQ8N3J5 372 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 DQX1Q8TE96 717 aaKnown RBP11.39□□□□□ -0.59
UBE2A-201ENST00000346330 SMARCE1Q969G3 411 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 BIRC7Q96CA5 298 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 FCRL2Q96LA5 508 aaPredicted RBP11.39□□□□□ -0.59
UBE2A-201ENST00000346330 TSG101Q99816 390 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 NUP58Q9BVL2 599 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 DNAI2Q9GZS0 605 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 NUCKS1Q9H1E3 243 aaKnown RBP11.39□□□□□ -0.59
UBE2A-201ENST00000346330 LHX5Q9H2C1 402 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 TJP2Q9UDY2 1190 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 CYTH4Q9UIA0 394 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 NAALADL1Q9UQQ1 740 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 NFE2L3Q9Y4A8 694 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 ATP6V1DQ9Y5K8 247 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 SNX11Q9Y5W9 270 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 BPTFQ12830 3046 aa11.39□□□□□ -0.59
UBE2A-201ENST00000346330 NUMA1Q14980 2115 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 BIN1O00499 593 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 TIMM44O43615 452 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 ACSL4O60488 711 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 LTFP02788 710 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 PAEPP09466 180 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 DLDP09622 509 aaKnown RBP11.38□□□□□ -0.59
UBE2A-201ENST00000346330 ATXN1LP0C7T5 689 aaKnown RBP11.38□□□□□ -0.59
UBE2A-201ENST00000346330 TBXAS1P24557 533 aaPredicted RBP11.38□□□□□ -0.59
UBE2A-201ENST00000346330 TBX4P57082 545 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 APBA1Q02410 837 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 ARID5AQ03989 594 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 RING1Q06587 406 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 COL9A2Q14055 689 aaPredicted RBP11.38□□□□□ -0.59
UBE2A-201ENST00000346330 CNGA2Q16280 664 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 ZNF423Q2M1K9 1284 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 SCUBE3Q8IX30 993 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 AHI1Q8N157 1196 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 BAHD1Q8TBE0 780 aaPredicted RBP11.38□□□□□ -0.59
UBE2A-201ENST00000346330 WFIKKN2Q8TEU8 576 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 ADAMTS14Q8WXS8 1223 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 MRGPRX3Q96LB0 322 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 NT5C1BQ96P26 610 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 EBF2Q9HAK2 575 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 TM9SF3Q9HD45 589 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 TM7SF3Q9NS93 570 aa11.38□□□□□ -0.59
UBE2A-201ENST00000346330 CKAP5Q14008 2032 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 TMEM8BA6NDV4 472 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 WNT9AO14904 365 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 PMM2O15305 246 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 SMC2O95347 1197 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 SEMA4FO95754 770 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 LATS1O95835 1130 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 IGHV4-34P06331 123 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 OXTRP30559 389 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 CSKP41240 450 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 MATKP42679 507 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 GPD2P43304 727 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 METAP1P53582 386 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 STX17P56962 302 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 YWHAEP62258 255 aaKnown RBP11.37□□□□□ -0.59
UBE2A-201ENST00000346330 IL9RQ01113 521 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 SCAPQ12770 1279 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 TAF5Q15542 800 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 CCDC40Q4G0X9 1142 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 PRAMEF14Q5SWL7 426 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 GJB7Q6PEY0 223 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 DBX2Q6ZNG2 339 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 TAC4Q86UU9 113 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 CIR1Q86X95 450 aaPredicted RBP11.37□□□□□ -0.59
UBE2A-201ENST00000346330 MFN1Q8IWA4 741 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 TRIM59Q8IWR1 403 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 DHX40Q8IX18 779 aaKnown RBP11.37□□□□□ -0.59
UBE2A-201ENST00000346330 SETD7Q8WTS6 366 aaKnown RBP11.37□□□□□ -0.59
UBE2A-201ENST00000346330 NELFBQ8WX92 580 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 SLC39A13Q96H72 371 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 ZDHHC5Q9C0B5 715 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 KIAA1257Q9ULG3 409 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 PLA2G4CQ9UP65 541 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 CTNND2Q9UQB3 1225 aa11.37□□□□□ -0.59
UBE2A-201ENST00000346330 FASNP49327 2511 aaKnown RBP11.37□□□□□ -0.59
UBE2A-201ENST00000346330 FAM47DPA6NHR8 397 aa11.36□□□□□ -0.59
UBE2A-201ENST00000346330 GOLGA8CPA6NN73 597 aa11.36□□□□□ -0.59
UBE2A-201ENST00000346330 TTC34A8MYJ7 566 aa11.36□□□□□ -0.59
UBE2A-201ENST00000346330 H0Y626 953 aa11.36□□□□□ -0.59
UBE2A-201ENST00000346330 H0Y8X5 98 aa11.36□□□□□ -0.59
UBE2A-201ENST00000346330 PSMA7O14818 248 aa11.36□□□□□ -0.59
UBE2A-201ENST00000346330 PAPSS1O43252 624 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms