RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ATP2A3Q93084 1043 aa15.26■□□□□ 0.03
CLCN1-201ENST00000343257 SIGLEC10Q96LC7 697 aa15.26■□□□□ 0.03
CLCN1-201ENST00000343257 NLRP4Q96MN2 994 aa15.26■□□□□ 0.03
CLCN1-201ENST00000343257 SERPINI1Q99574 410 aa15.26■□□□□ 0.03
CLCN1-201ENST00000343257 SLC29A1Q99808 456 aa15.26■□□□□ 0.03
CLCN1-201ENST00000343257 EBNA1BP2Q99848 306 aaKnown RBP15.26■□□□□ 0.03
CLCN1-201ENST00000343257 GCOM2Q9BZD3 368 aaPredicted RBP15.26■□□□□ 0.03
CLCN1-201ENST00000343257 OSBPL6Q9BZF3 934 aa15.26■□□□□ 0.03
CLCN1-201ENST00000343257 UNKQ9C0B0 810 aaKnown RBP15.26■□□□□ 0.03
CLCN1-201ENST00000343257 TCF7L2Q9NQB0 619 aa15.26■□□□□ 0.03
CLCN1-201ENST00000343257 DNAJC28Q9NX36 388 aa15.26■□□□□ 0.03
CLCN1-201ENST00000343257 HES2Q9Y543 173 aa15.26■□□□□ 0.03
CLCN1-201ENST00000343257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.25■□□□□ 0.03
CLCN1-201ENST00000343257 J3QRK9 145 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 ERVK-10P10266 1014 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 DLG2Q15700 870 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 Q6ZNX1 250 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 TDRD5Q8NAT2 981 aaKnown RBP15.25■□□□□ 0.03
CLCN1-201ENST00000343257 PDCD6IPQ8WUM4 868 aaKnown RBP15.25■□□□□ 0.03
CLCN1-201ENST00000343257 PPWD1Q96BP3 646 aaKnown RBP15.25■□□□□ 0.03
CLCN1-201ENST00000343257 FBXL8Q96CD0 374 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 HAUS8Q9BT25 410 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 CAB39LQ9H9S4 337 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 NGRNQ9NPE2 291 aaKnown RBP15.25■□□□□ 0.03
CLCN1-201ENST00000343257 SH3PXD2BA1X283 911 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 FAM159BA6NKW6 160 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 K7ERI5 159 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 TRDMT1O14717 391 aaKnown RBP15.25■□□□□ 0.03
CLCN1-201ENST00000343257 CPA3P15088 417 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 CKMT2P17540 419 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 CDK9P50750 372 aaKnown RBP15.25■□□□□ 0.03
CLCN1-201ENST00000343257 PDAP1Q13442 181 aaKnown RBP15.25■□□□□ 0.03
CLCN1-201ENST00000343257 TRPC3Q13507 836 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 ZNF423Q2M1K9 1284 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 MGAT5BQ3V5L5 792 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 MTX3Q5HYI7 312 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 WDR78Q5VTH9 848 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 CDAN1Q8IWY9 1227 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 ADCY4Q8NFM4 1077 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 THAP11Q96EK4 314 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 PIWIL1Q96J94 861 aaKnown RBP15.25■□□□□ 0.03
CLCN1-201ENST00000343257 COPG2Q9UBF2 871 aa15.25■□□□□ 0.03
CLCN1-201ENST00000343257 GLRA3O75311 464 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 ALOX15P16050 662 aaPredicted RBP15.24■□□□□ 0.03
CLCN1-201ENST00000343257 OLIG2Q13516 323 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 PQLC3Q8N755 202 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 ZDHHC15Q96MV8 337 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 ADPGKQ9BRR6 497 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 RSAD1Q9HA92 442 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 WDR41Q9HAD4 459 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 PLK2Q9NYY3 685 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 ARSAP15289 507 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 CTBSQ01459 385 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 LAYNQ6UX15 382 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 ZNF786Q8N393 782 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 PLD5Q8N7P1 536 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 IRGQQ8WZA9 623 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 MAML3Q96JK9 1138 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 SDCBP2Q9H190 292 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 UBIAD1Q9Y5Z9 338 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 FOCADQ5VW36 1801 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 PRKCGP05129 697 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 ZNF23P17027 643 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 IRF9Q00978 393 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 RELAQ04206 551 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 RALGDSQ12967 914 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 MTA1Q13330 715 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 CA9Q16790 459 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 Q3C1V9 767 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 SLC27A3Q5K4L6 730 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 NIPA2Q8N8Q9 360 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 FAM47BQ8NA70 645 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 DEPTORQ8TB45 409 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 C12orf43Q96C57 262 aaKnown RBP15.24■□□□□ 0.03
CLCN1-201ENST00000343257 RMND5BQ96G75 393 aaPredicted RBP15.24■□□□□ 0.03
CLCN1-201ENST00000343257 CGRRF1Q99675 332 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 TRNAU1APQ9NX07 287 aaKnown RBP15.24■□□□□ 0.03
CLCN1-201ENST00000343257 TXNDC16Q9P2K2 825 aa15.24■□□□□ 0.03
CLCN1-201ENST00000343257 MYO18AQ92614 2054 aaKnown RBP15.23■□□□□ 0.03
CLCN1-201ENST00000343257 CCDC78A2IDD5 438 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 PSMD12O00232 456 aaPredicted RBP15.23■□□□□ 0.03
CLCN1-201ENST00000343257 GIPC1O14908 333 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 H6PDO95479 791 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 LTFP02788 710 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 OCM2P0CE71 109 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 OCMP0CE72 109 aaPredicted RBP15.23■□□□□ 0.03
CLCN1-201ENST00000343257 ME2P23368 584 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 POLR2BP30876 1174 aaKnown RBP15.23■□□□□ 0.03
CLCN1-201ENST00000343257 RPL26P61254 145 aaKnown RBP15.23■□□□□ 0.03
CLCN1-201ENST00000343257 RPS6P62753 249 aaKnown RBP15.23■□□□□ 0.03
CLCN1-201ENST00000343257 CDK18Q07002 472 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 RC3H1Q5TC82 1133 aaKnown RBP15.23■□□□□ 0.03
CLCN1-201ENST00000343257 FAM219BQ5XKK7 198 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 C16orf87Q6PH81 154 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 KCNT2Q6UVM3 1135 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 TRIM50Q86XT4 487 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 CMASQ8NFW8 434 aaPredicted RBP15.23■□□□□ 0.03
CLCN1-201ENST00000343257 FAM110BQ8TC76 370 aa15.23■□□□□ 0.03
CLCN1-201ENST00000343257 SLC35B4Q969S0 331 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms