RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 RPGRIP1Q96KN7 1286 aa16.89■□□□□ 0.29
SNED1-202ENST00000342631 CAPZA3Q96KX2 299 aa16.89■□□□□ 0.29
SNED1-202ENST00000342631 ZSWIM3Q96MP5 696 aa16.89■□□□□ 0.29
SNED1-202ENST00000342631 CFAP97Q9P2B7 532 aa16.89■□□□□ 0.29
SNED1-202ENST00000342631 XPO7Q9UIA9 1087 aaKnown RBP16.89■□□□□ 0.29
SNED1-202ENST00000342631 DENND4AQ7Z401 1863 aa16.89■□□□□ 0.29
SNED1-202ENST00000342631 E9PAM4 449 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 F5H5T6 163 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 FAM72CH0Y354 149 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 DAPK3O43293 454 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 GOT1P17174 413 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 CHKAP35790 457 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 USP4Q13107 963 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 KLF1Q13351 362 aaPredicted RBP16.88■□□□□ 0.29
SNED1-202ENST00000342631 CBX2Q14781 532 aaPredicted RBP16.88■□□□□ 0.29
SNED1-202ENST00000342631 C5orf22Q49AR2 442 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 FAM72AQ5TYM5 149 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 FAM72DQ6L9T8 149 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 AADACL2Q6P093 401 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 BBS12Q6ZW61 710 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 Q7L0L9 218 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 CHSY1Q86X52 802 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 FAM72BQ86X60 149 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 CEP112Q8N8E3 955 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 SUSD6Q92537 303 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 OTUB2Q96DC9 234 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 MS4A14Q96JA4 679 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 ASB16Q96NS5 453 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 GUCD1Q96NT3 240 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 CATSPERBQ9H7T0 1116 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 HOMER3Q9NSC5 361 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 TBC1D14Q9P2M4 693 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 TACR2P21452 398 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 MMRN1Q13201 1228 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 DPYSQ14117 519 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 ZNF77Q15935 545 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 FAM133BQ5BKY9 247 aaKnown RBP16.88■□□□□ 0.29
SNED1-202ENST00000342631 SLC9A4Q6AI14 798 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 NADSYN1Q6IA69 706 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 RFX6Q8HWS3 928 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 ZNF683Q8IZ20 524 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 CPXM2Q8N436 756 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 TTC13Q8NBP0 860 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 PCDH19Q8TAB3 1148 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 FRMD8P1Q9BZ68 369 aaPredicted RBP16.88■□□□□ 0.29
SNED1-202ENST00000342631 MAGEB5Q9BZ81 275 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 ARHGEF4Q9NR80 690 aa16.88■□□□□ 0.29
SNED1-202ENST00000342631 GOLGA6L10A0A0M3HER8 536 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 DRGXA6NNA5 263 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 SLC9A3R1O14745 358 aaPredicted RBP16.87■□□□□ 0.29
SNED1-202ENST00000342631 APOL1O14791 398 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 PRAMEF12O95522 483 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 KRT10P13645 584 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 TGM2P21980 687 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 EPHB2P29323 1055 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 RABGAP1LQ5R372 815 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 TTC39BQ5VTQ0 682 aaPredicted RBP16.87■□□□□ 0.29
SNED1-202ENST00000342631 KAZNQ674X7 775 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 RAP1GAP2Q684P5 730 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 FBXL22Q6P050 247 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 ANKS1BQ7Z6G8 1248 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 HEMGNQ9BXL5 484 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 ZYG11BQ9C0D3 744 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 UBE2ZQ9H832 354 aaPredicted RBP16.87■□□□□ 0.29
SNED1-202ENST00000342631 CCL26Q9Y258 94 aa16.87■□□□□ 0.29
SNED1-202ENST00000342631 WASH4PA8MWX3 477 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 CST8O60676 142 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 NR2C2P49116 596 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 FAM78AQ5JUQ0 283 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 BZW1Q7L1Q6 419 aaKnown RBP16.86■□□□□ 0.29
SNED1-202ENST00000342631 LZTR1Q8N653 840 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 WBP2Q969T9 261 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 VANGL2Q9ULK5 521 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 RAD54BQ9Y620 910 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 TYW5A2RUC4 315 aaKnown RBP16.86■□□□□ 0.29
SNED1-202ENST00000342631 CCDC188H7C350 402 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 APOC4-APOC2K7ER74 178 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 APOC2P02655 101 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 RHOQP17081 205 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 SERPINB6P35237 376 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 SMAD4Q13485 552 aaKnown RBP16.86■□□□□ 0.29
SNED1-202ENST00000342631 RWDD4Q6NW29 188 aaKnown RBP16.86■□□□□ 0.29
SNED1-202ENST00000342631 POTEHQ6S545 545 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 OTOP3Q7RTS5 596 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 C14orf80Q86SX3 495 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 PQLC3Q8N755 202 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 RPRD1AQ96P16 312 aaPredicted RBP16.86■□□□□ 0.29
SNED1-202ENST00000342631 SMG9Q9H0W8 520 aaKnown RBP16.86■□□□□ 0.29
SNED1-202ENST00000342631 POMKQ9H5K3 350 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 CDH22Q9UJ99 828 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 NEU3Q9UQ49 428 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 USP15Q9Y4E8 981 aaPredicted RBP16.86■□□□□ 0.29
SNED1-202ENST00000342631 SNX10Q9Y5X0 201 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 DOCK4Q8N1I0 1966 aa16.86■□□□□ 0.29
SNED1-202ENST00000342631 PDE2AO00408 941 aaPredicted RBP16.85■□□□□ 0.29
SNED1-202ENST00000342631 KRIT1O00522 736 aa16.85■□□□□ 0.29
SNED1-202ENST00000342631 DCLK1O15075 740 aa16.85■□□□□ 0.29
SNED1-202ENST00000342631 ERCC2P18074 760 aa16.85■□□□□ 0.29
SNED1-202ENST00000342631 AMPD1P23109 780 aa16.85■□□□□ 0.29
SNED1-202ENST00000342631 PAFAH1B3Q15102 231 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms