RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ZNF248Q8NDW4 579 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 CDK5RAP1Q96SZ6 601 aaKnown RBP17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 CAAP1Q9H8G2 361 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 SLC39A2Q9NP94 309 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 NCKAP1Q9Y2A7 1128 aa17.07■□□□□ 0.32
NECTIN1-202ENST00000340882 COL27A1Q8IZC6 1860 aaPredicted RBP17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 MT-CO3P00414 261 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 MPOP05164 745 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 C6P13671 934 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 RXRGP48443 463 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 TMPRSS3P57727 454 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 YWHAGP61981 247 aaKnown RBP eCLIP17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 PDE4CQ08493 712 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 ILKQ13418 452 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 PROX2Q3B8N5 592 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 SV2AQ7L0J3 742 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 RSRC2Q7L4I2 434 aaKnown RBP17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 LURAP1LQ8IV03 231 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 AHI1Q8N157 1196 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 GOLGA1Q92805 767 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 PLD4Q96BZ4 506 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 TMA16Q96EY4 203 aaKnown RBP17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 LMLNQ96KR4 655 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 NT5C1AQ9BXI3 368 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 TFIP11Q9UBB9 837 aaKnown RBP17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 SUN2Q9UH99 717 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 STRIP2Q9ULQ0 834 aa17.06■□□□□ 0.32
NECTIN1-202ENST00000340882 TLR4O00206 839 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 TRIM38O00635 465 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 SDC3O75056 442 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 WISP1O95388 367 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 HLA-DRAP01903 254 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 CD58P19256 250 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 ACP1P24666 158 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 ARRB1P49407 418 aaPredicted RBP17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 SLC39A14Q15043 492 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 CST6Q15828 149 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 KNOP1Q1ED39 458 aaKnown RBP17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 CNNM4Q6P4Q7 775 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 DHX40Q8IX18 779 aaKnown RBP17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 AADATQ8N5Z0 425 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 OR2T34Q8NGX1 318 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 SKA1Q96BD8 255 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 DHX58Q96C10 678 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 SERAC1Q96JX3 654 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 BLZF1Q9H2G9 400 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 DMAC2Q9NW81 257 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 SFMBT1Q9UHJ3 866 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 STOML2Q9UJZ1 356 aa17.05■□□□□ 0.32
NECTIN1-202ENST00000340882 BOD1L1Q8NFC6 3051 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 GOLGA6L7A0A1B0GV03 622 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 YKT6O15498 198 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 SIGLEC6O43699 453 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 RNASEH2AO75792 299 aaKnown RBP17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 PCBP4P57723 403 aaKnown RBP17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 PPP2CBP62714 309 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 PPP2CAP67775 309 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 KIF26BQ2KJY2 2108 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 ZNF394Q53GI3 561 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 RAB41Q5JT25 222 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 RFWD3Q6PCD5 774 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 UNC13DQ70J99 1090 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 PIGZQ86VD9 579 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 MMAAQ8IVH4 418 aaKnown RBP17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 TAF4BQ92750 862 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 MRGPRX3Q96LB0 322 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 C7orf25Q9BPX7 421 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 ADAMTS1Q9UHI8 967 aa17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 INTS6Q9UL03 887 aaKnown RBP17.04■□□□□ 0.32
NECTIN1-202ENST00000340882 LRRC72A6NJI9 287 aa17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 TULP2O00295 520 aa17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 SLC28A2O43868 658 aa17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 ATP5BP06576 529 aaKnown RBP17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 POLR2EP19388 210 aaKnown RBP17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 PIK3CAP42336 1068 aa17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 CCR5P51681 352 aa17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 SRSF1Q07955 248 aaKnown RBP eCLIP17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 HNRNPA1L2Q32P51 320 aaKnown RBP17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 C9orf64Q5T6V5 341 aa17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 MYEOVQ96EZ4 313 aa17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 ZNF578Q96N58 590 aaPredicted RBP17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 LRRC27Q9C0I9 530 aa17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 ERVMER34-1Q9H9K5 563 aa17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 CGNQ9P2M7 1197 aaKnown RBP17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 SCML1Q9UN30 329 aa17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.03■□□□□ 0.32
NECTIN1-202ENST00000340882 KLK10O43240 276 aa17.02■□□□□ 0.32
NECTIN1-202ENST00000340882 MSI1O43347 362 aaKnown RBP17.02■□□□□ 0.32
NECTIN1-202ENST00000340882 TBL1XO60907 577 aa17.02■□□□□ 0.32
NECTIN1-202ENST00000340882 SLC6A4P31645 630 aa17.02■□□□□ 0.32
NECTIN1-202ENST00000340882 SLC8A1P32418 973 aa17.02■□□□□ 0.32
NECTIN1-202ENST00000340882 CTSOP43234 321 aaPredicted RBP17.02■□□□□ 0.32
NECTIN1-202ENST00000340882 HARS2P49590 506 aaKnown RBP17.02■□□□□ 0.32
NECTIN1-202ENST00000340882 TKTL1P51854 596 aa17.02■□□□□ 0.32
NECTIN1-202ENST00000340882 ADPRHP54922 357 aa17.02■□□□□ 0.32
NECTIN1-202ENST00000340882 GABREP78334 506 aa17.02■□□□□ 0.32
NECTIN1-202ENST00000340882 C8orf34Q49A92 452 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms