RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SERPINB4P48594 390 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SCNN1GP51170 649 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CRADDP78560 199 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 OVGP1Q12889 678 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 NME3Q13232 169 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 HSF5Q4G112 596 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TIGD5Q53EQ6 642 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CYS1Q717R9 158 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ZNF567Q8N184 647 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 COLGALT1Q8NBJ5 622 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 DPF3Q92784 378 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 NTAN1Q96AB6 310 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ABHD8Q96I13 439 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PGLYRP2Q96PD5 576 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MED10Q9BTT4 135 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PRDM16Q9HAZ2 1276 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 NPHS2Q9NP85 383 aa13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 EIF2B3Q9NR50 452 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP1-201ENST00000339269 WDR27A2RRH5 827 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CASTOR2A6NHX0 329 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CREB3O43889 395 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 OPHN1O60890 802 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TOP3BO95985 862 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 GSRP00390 522 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MYCP01106 439 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 IL1BP01584 269 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MLNP12872 115 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 FDFT1P37268 417 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 NKX3-2P78367 333 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 OLIG2Q13516 323 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 RIPK1Q13546 671 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SNCBQ16143 134 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 UPP1Q16831 310 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 NLRP9Q7RTR0 991 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SIX6OS1Q8N1H7 587 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TMEM86AQ8N2M4 240 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PDCD7Q8N8D1 485 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SLAIN1Q8ND83 568 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SLC7A14Q8TBB6 771 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TRIB2Q92519 343 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SLC7A6OSQ96CW6 309 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PGAP3Q96FM1 320 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SLC9A7Q96T83 725 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SLC38A7Q9NVC3 462 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PIH1D1Q9NWS0 290 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 FBXW11Q9UKB1 542 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 NEU3Q9UQ49 428 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PLLPQ9Y342 182 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SNX10Q9Y5X0 201 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MAD1L1Q9Y6D9 718 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 I3L4J1 428 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 FBXO21O94952 628 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 THP07101 528 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 USP17L7P0C7H9 530 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 GBP2P32456 591 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 LHX1P48742 406 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TRIM32Q13049 653 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 DSC3Q14574 896 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TEX44Q53QW1 395 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 GNASQ5JWF2 1037 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 LRRC8BQ6P9F7 803 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TIFABQ6ZNK6 161 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 RPAINQ86UA6 219 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ZNF398Q8TD17 642 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MAGEC3Q8TD91 643 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 KLHL29Q96CT2 875 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PRR11Q96HE9 360 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MECRQ9BV79 373 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 LRMDAQ9H2I8 198 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 NOD2Q9HC29 1040 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CSNK1G1Q9HCP0 422 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CNGB3Q9NQW8 809 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CHST12Q9NRB3 414 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TMLHEQ9NVH6 421 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 IGSF9Q9P2J2 1179 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 STAP1Q9ULZ2 295 aa13.36□□□□□ -0.27
CDK5RAP1-201ENST00000339269 EEF2KO00418 725 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ADAMTS4O75173 837 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 DLDP09622 509 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ERCC2P18074 760 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MGAT1P26572 445 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CD68P34810 354 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CDK16Q00536 496 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 AP1B1Q10567 949 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SWT1Q5T5J6 900 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MARK2Q7KZI7 788 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 ZSCAN18Q8TBC5 510 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PXYLP1Q8TE99 480 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 MYLPFQ96A32 169 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 TTC17Q96AE7 1141 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 STAMBPL1Q96FJ0 436 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 SIRPGQ9P1W8 387 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CDH9Q9ULB4 789 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 GIT1Q9Y2X7 761 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 PSAT1Q9Y617 370 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 IKBKGQ9Y6K9 419 aa13.35□□□□□ -0.27
CDK5RAP1-201ENST00000339269 COPEO14579 308 aa13.34□□□□□ -0.27
CDK5RAP1-201ENST00000339269 KLF11O14901 512 aa13.34□□□□□ -0.27
CDK5RAP1-201ENST00000339269 CHUKO15111 745 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms