RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 SPATA6Q9NWH7 488 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3B-201ENST00000333467 GRHL1Q9NZI5 618 aa11.53□□□□□ -0.56
APOBEC3B-201ENST00000333467 ZMYM5Q9UJ78 669 aa11.53□□□□□ -0.56
APOBEC3B-201ENST00000333467 CCL26Q9Y258 94 aa11.53□□□□□ -0.56
APOBEC3B-201ENST00000333467 MRPS17Q9Y2R5 130 aaKnown RBP11.53□□□□□ -0.56
APOBEC3B-201ENST00000333467 PRR23AA6NEV1 266 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 MAN2B1O00754 1011 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 RGS16O15492 202 aaPredicted RBP11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 GAS8O95995 478 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 FLT3P36888 993 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 GNL1P36915 607 aaPredicted RBP11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 GRIK1P39086 918 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 CETN2P41208 172 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 MMP13P45452 471 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 SOX9P48436 509 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 CACNA2D1P54289 1103 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 PLTPP55058 493 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 CDH8P55286 799 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 WDR44Q5JSH3 913 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 ERMARDQ5T6L9 678 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 CCDC121Q6ZUS5 278 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 CACNA2D3Q8IZS8 1091 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 ZNF687Q8N1G0 1237 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 CELF5Q8N6W0 485 aaKnown RBP11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 B3GALNT2Q8NCR0 500 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 TTC8Q8TAM2 541 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 RIN3Q8TB24 985 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 DDX1Q92499 740 aaKnown RBP11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 FAM3CQ92520 227 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 USP13Q92995 863 aaPredicted RBP11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 TATDN2Q93075 761 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 RNF166Q96A37 237 aaPredicted RBP11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 CLDN23Q96B33 292 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 PCDHB18PQ96TA0 734 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 ZNF518BQ9C0D4 1074 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 NSRP1Q9H0G5 558 aaKnown RBP11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 SDCBP2Q9H190 292 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 KIF9Q9HAQ2 790 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 TRPC7Q9HCX4 862 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 MRPL47Q9HD33 250 aaKnown RBP11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 TMEM30AQ9NV96 361 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 GTSE1Q9NYZ3 720 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 BCCIPQ9P287 314 aaKnown RBP eCLIP11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 EML5Q05BV3 1969 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 DMXL1Q9Y485 3027 aa11.52□□□□□ -0.57
APOBEC3B-201ENST00000333467 F8VP50 259 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 NCAM2O15394 837 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 PSTPIP1O43586 416 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 CKMP06732 381 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 PTPN1P18031 435 aaKnown RBP11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 TBXAS1P24557 533 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 CTHP32929 405 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 RPS9P46781 194 aaKnown RBP11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 KPNA1P52294 538 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 USP46P62068 366 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 TNK2Q07912 1038 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 ZNF211Q13398 564 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 TNFAIP8L3Q5GJ75 292 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 TTC19Q6DKK2 380 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 SPOPLQ6IQ16 392 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 DENND5BQ6ZUT9 1274 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 SV2AQ7L0J3 742 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 ASCL5Q7RTU5 278 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 SLC47A2Q86VL8 602 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 DNAAF5Q86Y56 855 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 CCDC50Q8IVM0 306 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 MAML2Q8IZL2 1156 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 ANKS4BQ8N8V4 417 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 OR2W6PQ8NHA6 318 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 FBXO25Q8TCJ0 367 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 CCHCR1Q8TD31 782 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 KRT35Q92764 455 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 C18orf8Q96DM3 657 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 CHMP6Q96FZ7 201 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 MSANTD3Q96H12 275 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 SPATA17Q96L03 361 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 XPO6Q96QU8 1125 aaKnown RBP11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 SLC22A12Q96S37 553 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 NELL2Q99435 816 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 ZFHX2Q9C0A1 2572 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 ELOVL4Q9GZR5 314 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 CNOT8Q9UFF9 292 aaKnown RBP11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 HMGXB4Q9UGU5 601 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 SNX24Q9Y343 169 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 SCINQ9Y6U3 715 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 R4GN57 208 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 ATG2BQ96BY7 2078 aa11.51□□□□□ -0.57
APOBEC3B-201ENST00000333467 C2orf78A6NCI8 922 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 SPECC1L-ADORA2AF8WAN1 911 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 H0YHG0 523 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 CLDN5O00501 218 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 RIPK2O43353 540 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 THAP12O43422 761 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 LAMTOR5O43504 91 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 TCEA3O75764 348 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 ASS1P00966 412 aaKnown RBP11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 HLA-DRAP01903 254 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 MMEP08473 750 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 FAM163BP0C2L3 166 aa11.5□□□□□ -0.57
APOBEC3B-201ENST00000333467 SP9P0CG40 484 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms